RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 MICAL3Q7RTP6 2002 aa18.8■□□□□ 0.6
STRADB-202ENST00000392249 LYPLA1O75608 230 aaPredicted RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 CXCL10P02778 98 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 RING1Q06587 406 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 SEPT6Q14141 434 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 GRM3Q14832 879 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 DBN1Q16643 649 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 SLC25A41Q8N5S1 370 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 THAP1Q9NVV9 213 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 COPG2Q9UBF2 871 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 ZNF212Q9UDV6 495 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 HBS1LQ9Y450 684 aaKnown RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 TTC24A2A3L6 582 aaPredicted RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 ITM2AO43736 263 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 RAMP2O60895 175 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 HAUS5O94927 633 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 SAT1P21673 171 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 OR1D2P34982 312 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 CD86P42081 329 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 POLD3Q15054 466 aaPredicted RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 SNCBQ16143 134 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 SPDYAQ5MJ70 313 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 KDELC1Q6UW63 502 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 TTC7BQ86TV6 843 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 DENND6AQ8IWF6 608 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 TNS4Q8IZW8 715 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 IMP4Q96G21 291 aaKnown RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 UBE2OQ9C0C9 1292 aaKnown RBP18.79■□□□□ 0.6
STRADB-202ENST00000392249 RNF208Q9H0X6 261 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 LRMDAQ9H2I8 198 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 COMMD8Q9NX08 183 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 KCNK4Q9NYG8 393 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 SLC39A10Q9ULF5 831 aa18.79■□□□□ 0.6
STRADB-202ENST00000392249 DRGXA6NNA5 263 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 C2P06681 752 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 ARNTP27540 789 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 OR1E1P30953 314 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 PGGT1BP53609 377 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 DSC2Q02487 901 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 CNGA3Q16281 694 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 HSF5Q4G112 596 aaPredicted RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 SLC8B1Q6J4K2 584 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 ALYREFQ86V81 257 aaKnown RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 ZC3HC1Q86WB0 502 aaKnown RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 VN1R3Q9BXE9 311 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 NSMCE4AQ9NXX6 385 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 MPOP05164 745 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 TACR2P21452 398 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 GABRB3P28472 473 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 ETFBP38117 255 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 ARCN1P48444 511 aaKnown RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 AQP5P55064 265 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 CTBP1Q13363 440 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 CCDC153Q494R4 210 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 CCDC117Q8IWD4 279 aaPredicted RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 SLC7A6OSQ96CW6 309 aaPredicted RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 GPR22Q99680 433 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 TTLL2Q9BWV7 592 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 OXCT2Q9BYC2 517 aaPredicted RBP18.78■□□□□ 0.6
STRADB-202ENST00000392249 RHOJQ9H4E5 214 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 MTRRQ9UBK8 725 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 BAIAP2L1Q9UHR4 511 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 OGDHLQ9ULD0 1010 aa18.78■□□□□ 0.6
STRADB-202ENST00000392249 A8MUI8 341 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 DNAJC6O75061 913 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 ATP6V1G2O95670 118 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 AHSGP02765 367 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 ACVRL1P37023 503 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 SLC1A6P48664 564 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 MPP1Q00013 466 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 RAPH1Q70E73 1250 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 CLEC14AQ86T13 490 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 CFAP52Q8N1V2 620 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 NSMCE1Q8WV22 266 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 PTCD2Q8WV60 388 aaKnown RBP18.77■□□□□ 0.6
STRADB-202ENST00000392249 FATE1Q969F0 183 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 UTP4Q969X6 686 aaKnown RBP18.77■□□□□ 0.6
STRADB-202ENST00000392249 ZNF512Q96ME7 567 aaPredicted RBP18.77■□□□□ 0.6
STRADB-202ENST00000392249 NACA2Q9H009 215 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 SAR1AQ9NR31 198 aa18.77■□□□□ 0.6
STRADB-202ENST00000392249 SERPINE1P05121 402 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 MMP2P08253 660 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 CPA3P15088 417 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 IHHQ14623 411 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 KIAA1841Q6NSI8 718 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 RFWD3Q6PCD5 774 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 CNTN4Q8IWV2 1026 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 LGI2Q8N0V4 545 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 NMUR2Q9GZQ4 415 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 MRM3Q9HC36 420 aaKnown RBP18.76■□□□□ 0.59
STRADB-202ENST00000392249 TREX1Q9NSU2 369 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 ARL8BQ9NVJ2 186 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 F5H5T6 163 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 FCHO1O14526 889 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 PHGDHO43175 533 aaKnown RBP18.76■□□□□ 0.59
STRADB-202ENST00000392249 CCL5P13501 91 aa18.76■□□□□ 0.59
STRADB-202ENST00000392249 ATP5C1P36542 298 aaKnown RBP18.76■□□□□ 0.59
STRADB-202ENST00000392249 KPNA1P52294 538 aaPredicted RBP18.76■□□□□ 0.59
STRADB-202ENST00000392249 TLE2Q04725 743 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms