RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 WNT3AP56704 352 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZXDBP98169 803 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 CYP4F8P98187 520 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 PCID2Q5JVF3 399 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ALG1LQ6GMV1 187 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 POTEHQ6S545 545 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF783Q6ZMS7 281 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 PGBD5Q8N414 524 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARRDC2Q8TBH0 407 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF473Q8WTR7 871 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 SERAC1Q96JX3 654 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 GCNAQ96QF7 691 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 POLR1EQ9GZS1 481 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 RABEP2Q9H5N1 569 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ARNT2Q9HBZ2 717 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 MRM3Q9HC36 420 aaKnown RBP11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 ASAH2Q9NR71 780 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
SMARCAL1-203ENST00000392128 TM9SF1O15321 606 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ETFBP38117 255 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 WDR4P57081 412 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 MAXP61244 160 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 DSC2Q02487 901 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ITKQ08881 620 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 PPM1LQ5SGD2 360 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 IL31Q6EBC2 164 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 CES3Q6UWW8 571 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 MAB21L3Q8N8X9 362 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 OR7D4Q8NG98 312 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 MFSD3Q96ES6 412 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 C17orf80Q9BSJ5 609 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ACE2Q9BYF1 805 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ATXN3LQ9H3M9 355 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 MLXIPLQ9NP71 852 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 CHRAC1Q9NRG0 131 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZFATQ9P243 1243 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF510Q9Y2H8 683 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 TRAV19A0A0A6YYK7 116 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 HMX2A2RU54 273 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 TSPAN3O60637 253 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 RB1P06400 928 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 CD86P42081 329 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 EPHA5P54756 1037 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 OXCT1P55809 520 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 IL9RQ01113 521 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 DNAJC3Q13217 504 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 ZNF235Q14590 738 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 RFTN1Q14699 578 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 CXorf57Q6NSI4 855 aaKnown RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 PKN3Q6P5Z2 889 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 PACS1Q6VY07 963 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 TIFABQ6ZNK6 161 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 BBS5Q8N3I7 341 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 HJURPQ8NCD3 748 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 APOPT1Q96IL0 206 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 MAGEB18Q96M61 343 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 LBHD1Q9BQE6 289 aaPredicted RBP11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 HTATIP2Q9BUP3 242 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 GBF1Q92538 1859 aa11.61□□□□□ -0.55
SMARCAL1-203ENST00000392128 A0A1W2PRU2 124 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 TYW5A2RUC4 315 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CCL16O15467 120 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 LPXNO60711 386 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 FGF19O95750 216 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CKMP06732 381 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 ERVK-10P10266 1014 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 DRD4P21917 467 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CCNFP41002 786 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC14A2Q15849 920 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 HTR3DQ70Z44 454 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 TAX1BP1Q86VP1 789 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 PPHLN1Q8NEY8 458 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 GDAP1Q8TB36 358 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 SLC22A17Q8WUG5 538 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CPNE1Q99829 537 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CORO1BQ9BR76 489 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 MKS1Q9NXB0 559 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 UBA2Q9UBT2 640 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 PRKAG3Q9UGI9 489 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 GOLGA8RI6L899 631 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 TBL1XO60907 577 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 RFPL1O75677 317 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 PYGBP11216 843 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 MYL4P12829 197 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 NMBRP28336 390 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 HOXA9P31269 272 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 GP5P40197 560 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 NEK3P51956 506 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 IHHQ14623 411 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 PCSK7Q16549 785 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 CPXM2Q8N436 756 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 PSKH2Q96QS6 385 aa11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-203ENST00000392128 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms