RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 FSBPO95073 299 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 GSRP00390 522 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PRNPP04156 253 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZNF883P0CG24 379 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 TCF4P15884 667 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 CSNK1EP49674 416 aaKnown RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 CCNHP51946 323 aaPredicted RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 ZNF135P52742 658 aaPredicted RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 NDST2P52849 883 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 TPI1P60174 286 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PPP2CBP62714 309 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 RACK1P63244 317 aaKnown RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PPP2CAP67775 309 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 SLC14A1Q13336 389 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 DPYSQ14117 519 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PIGHQ14442 188 aaPredicted RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 DPYSL2Q16555 572 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 BOLA3Q53S33 107 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 ARSIQ5FYB1 569 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 KCNT1Q5JUK3 1230 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 CCDC122Q5T0U0 273 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 NEK5Q6P3R8 708 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 TRIM69Q86WT6 500 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 ARHGAP12Q8IWW6 846 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 HEPHQ9BQS7 1158 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 DHX35Q9H5Z1 703 aaKnown RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PDFQ9HBH1 243 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 PREBQ9HCU5 417 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 DONSONQ9NYP3 566 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 CWC15Q9P013 229 aaKnown RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 IL36AQ9UHA7 158 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 HPCAL4Q9UM19 191 aa11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 FCF1Q9Y324 198 aaKnown RBP11.6□□□□□ -0.55
IGHV4-28-201ENST00000390612 A0A1B0GVT2 93 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 FAM47DPA6NHR8 397 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 WNT9AO14904 365 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 GIPC1O14908 333 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 VILLO15195 856 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 BNIP3LO60238 219 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 OPHN1O60890 802 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 LEFTY1O75610 366 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 WNT1P04628 370 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 ADRB1P08588 477 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 CEACAM1P13688 526 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 ITGB7P26010 798 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 NUDT1P36639 197 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 CTSKP43235 329 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 SLC25A11Q02978 314 aaKnown RBP11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 KIF19Q2TAC6 998 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 UAP1L1Q3KQV9 507 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 POM121L1PQ3SYA9 428 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 TXNRD3NBQ6F5E7 133 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 RFX8Q6ZV50 586 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 ERN2Q76MJ5 926 aaKnown RBP11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 OR2AP1Q8NGE2 309 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 SNX19Q92543 992 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 LRIG1Q96JA1 1093 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 BTBD6Q96KE9 485 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 CHP1Q99653 195 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 NUP85Q9BW27 656 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 GTPBP2Q9BX10 602 aaKnown RBP11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 SLC39A8Q9C0K1 460 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 IP6K2Q9UHH9 426 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 ANKRD6Q9Y2G4 727 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 MFHAS1Q9Y4C4 1052 aa11.59□□□□□ -0.55
IGHV4-28-201ENST00000390612 PTPRBP23467 1997 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3DA0A087WVF3 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3IA0A087WXS9 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3EA0A087X179 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3KA0A087X1G2 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3FA6NER0 549 aaPredicted RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3LB9A6J9 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 EEF2KO00418 725 aaKnown RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 KPNA3O00505 521 aaPredicted RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 BUB1O43683 1085 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 AP1G1O43747 822 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 PRAMEF11O60813 436 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 MFAP3LO75121 409 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TMCC1O94876 653 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 POP4O95707 220 aaKnown RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3HP0C7X1 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 RARAP10276 462 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 ERCC2P18074 760 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 RECQLP46063 649 aaPredicted RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 ARSEP51690 589 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 ATXN3P54252 364 aaPredicted RBP11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 CCDC15Q0P6D6 951 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 CYTH1Q15438 398 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TEAD4Q15561 434 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZNF423Q2M1K9 1284 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 HLA-BQ31612 363 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 MYLK3Q32MK0 819 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3GQ6DHY5 549 aa11.58□□□□□ -0.56
IGHV4-28-201ENST00000390612 TBC1D3CQ6IPX1 549 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms