RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 TRIM24O15164 1050 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 EXTL3O43909 919 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 ENDOD1O94919 500 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 IL18RAPO95256 599 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 CHRNGP07510 517 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 PPIL2Q13356 520 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MMAAQ8IVH4 418 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 EMC1Q8N766 993 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 CEP170P1Q96L14 293 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 MARK4Q96L34 752 aa14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 NTPCRQ9BSD7 190 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 GPN2Q9H9Y4 310 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-201ENST00000389386 TRIM13O60858 407 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 CPNE6O95741 557 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 TGM1P22735 817 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 CDH5P33151 784 aaPredicted RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 POLR2IP36954 125 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 IGBP1P78318 339 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 SUPT20HL1Q3ZLR7 823 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 FAM209AQ5JX71 171 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 LDLRAP1Q5SW96 308 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 TREML2Q5T2D2 321 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 INTS11Q5TA45 600 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 VSIG10LQ86VR7 867 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 PLD6Q8N2A8 252 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 PBXIP1Q96AQ6 731 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 CSF3RQ99062 836 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 APBA2Q99767 749 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 GATA5Q9BWX5 397 aaPredicted RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 UNC93B1Q9H1C4 597 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF408Q9H9D4 720 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 SFMBT1Q9UHJ3 866 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 PRORSD1PA6NEY8 169 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 TNFRSF10AO00220 468 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 METTL18O95568 372 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 CLIC3O95833 236 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 NR4A1P22736 598 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 TFDP2Q14188 446 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 INAVAQ3KP66 663 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 IRAK1BP1Q5VVH5 260 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 GADL1Q6ZQY3 521 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 NIPA1Q7RTP0 329 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 ERMP1Q7Z2K6 904 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 FAM110BQ8TC76 370 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 CEP44Q9C0F1 390 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 DKK3Q9UBP4 350 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 ATP11BQ9Y2G3 1177 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 RAP2CQ9Y3L5 183 aa14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 COPG1Q9Y678 874 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-201ENST00000389386 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 MSI1O43347 362 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 GMNNO75496 209 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 SEC14L2O76054 403 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 TFEBP19484 476 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 RPL14P50914 215 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 TPTEP56180 551 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 IFITM3Q01628 133 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 VGLL4Q14135 290 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PTPN20Q4JDL3 420 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CHST15Q7LFX5 561 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 EPHX4Q8IUS5 362 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PLD5Q8N7P1 536 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 USP33Q8TEY7 942 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 MOCOSQ96EN8 888 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 FBXL20Q96IG2 436 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 GLT1D1Q96MS3 346 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 ARMC1Q9NVT9 282 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF112Q9UJU3 913 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 USP18Q9UMW8 372 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 N6AMT1Q9Y5N5 214 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 DYTNA2CJ06 578 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 HEATR9A2RTY3 570 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 ZNF839A8K0R7 811 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 KCNU1A8MYU2 1149 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 NRP1O14786 923 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CLOCKO15516 846 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CDH6P55285 790 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 ATP6V0D1P61421 351 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 NSUN2Q08J23 767 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 RALGDSQ12967 914 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PDK2Q15119 407 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 STILQ15468 1287 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PGS1Q32NB8 556 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 MAP1SQ66K74 1059 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 NXNQ6DKJ4 435 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 ANKRD13BQ86YJ7 626 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CCDC60Q8IWA6 550 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 C4orf19Q8IY42 314 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 REPS2Q8NFH8 660 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 RAB2BQ8WUD1 216 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 TFAP2BQ92481 460 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CDKL2Q92772 493 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 PEBP4Q96S96 227 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms