RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
IFT88-203ENST00000389373 NYNRINQ9P2P1 1898 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 KIF26BQ2KJY2 2108 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 NEMP1O14524 444 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 SMAD6O43541 496 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 LEFTY1O75610 366 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 YEATS4O95619 227 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 TRUB2O95900 331 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 TSHRP16473 764 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 GGCXP38435 758 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 ETV5P41161 510 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 VASPP50552 380 aaPredicted RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 IRAK1P51617 712 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 NEK3P51956 506 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 PITX1P78337 314 aaPredicted RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 KCNAB2Q13303 367 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 MORC3Q14149 939 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 PTK2BQ14289 1009 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CNGA2Q16280 664 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CBWD6Q4V339 395 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CBWD3Q5JTY5 395 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CBWD5Q5RIA9 395 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 TTC39BQ5VTQ0 682 aaPredicted RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 KIAA1161Q6NSJ0 714 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 BORAQ6PGQ7 559 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 LINGO4Q6UY18 593 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CCDC47Q96A33 483 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 PRMT1Q99873 361 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 HDAC8Q9BY41 377 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 CLPBQ9H078 707 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 LRRN3Q9H3W5 708 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 ZNF71Q9NQZ8 489 aaPredicted RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 GPR27Q9NS67 375 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 KCNK4Q9NYG8 393 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 ACSL6Q9UKU0 697 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 VANGL2Q9ULK5 521 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 PCDHA7Q9UN72 937 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 FADS3Q9Y5Q0 445 aa9.85□□□□□ -0.83
IFT88-203ENST00000389373 COL27A1Q8IZC6 1860 aaPredicted RBP9.85□□□□□ -0.83
IFT88-203ENST00000389373 A0A1W2PQM1 296 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 ENO4A6NNW6 628 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 D6RAR5 112 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 LMO7DNF2Z398 122 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 M0QYT0 321 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 RNF225M0QZC1 329 aaPredicted RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 ACTN4O43707 911 aaKnown RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 RHOCP08134 193 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 PAEPP09466 180 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 EPB41P11171 864 aaKnown RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 ADRB3P13945 408 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 CTSEP14091 401 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 CASRP41180 1078 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 POLE2P56282 527 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 ENPEPQ07075 957 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 NFIL3Q16649 462 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 RESP18Q5W5W9 173 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 DPY19L3Q6ZPD9 716 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 KYQ8NBH2 561 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 SCG3Q8WXD2 468 aaKnown RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 KLF6Q99612 283 aaPredicted RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 ZSWIM1Q9BR11 485 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 LRRC61Q9BV99 259 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 SIK2Q9H0K1 926 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 ADNPQ9H2P0 1102 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 FAM204AQ9H8W3 233 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 PNMA8BQ9ULN7 279 aaPredicted RBP9.84□□□□□ -0.83
IFT88-203ENST00000389373 GPR34Q9UPC5 381 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 PLAAQ9Y263 795 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 OR51B4Q9Y5P0 310 aa9.84□□□□□ -0.83
IFT88-203ENST00000389373 CETN3O15182 167 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 SART1O43290 800 aaKnown RBP9.83□□□□□ -0.84
IFT88-203ENST00000389373 ADCY5O95622 1261 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 TBXAS1P24557 533 aaPredicted RBP9.83□□□□□ -0.84
IFT88-203ENST00000389373 L1CAMP32004 1257 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 CCR1P32246 355 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 ACADSBP45954 432 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 CCR10P46092 362 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 PFN3P60673 137 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 CDK17Q00537 523 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 PPARDQ03181 441 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 AUHQ13825 339 aaKnown RBP9.83□□□□□ -0.84
IFT88-203ENST00000389373 PHF19Q5T6S3 580 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 C22orf39Q6P5X5 142 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 RD3Q7Z3Z2 195 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 VPS36Q86VN1 386 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 HID1Q8IV36 788 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 ARL10Q8N8L6 244 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 PCDH19Q8TAB3 1148 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 LENG8Q96PV6 779 aaPredicted RBP9.83□□□□□ -0.84
IFT88-203ENST00000389373 PSMB7Q99436 277 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 CMKLR1Q99788 373 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 SRRTQ9BXP5 876 aaKnown RBP9.83□□□□□ -0.84
IFT88-203ENST00000389373 POPDC2Q9HBU9 364 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 DDIT4Q9NX09 232 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 VPS51Q9UID3 782 aa9.83□□□□□ -0.84
IFT88-203ENST00000389373 ANAPC2Q9UJX6 822 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms