RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 COL1A2P08123 1366 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 CNOT3O75175 753 aaKnown RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 BGNP21810 368 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 AP5B1Q2VPB7 878 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 IL31RAQ8NI17 732 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 METTL21AQ8WXB1 218 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 IL12RB2Q99665 862 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 PTCH2Q9Y6C5 1203 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 EIF3HO15372 352 aaKnown RBP eCLIP15.03■□□□□ -0
LRRK1-201ENST00000388948 LSP1P33241 339 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 CBX2Q14781 532 aaPredicted RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 C1orf186Q6ZWK4 172 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 HDDC3Q8N4P3 179 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 SEMA4BQ9NPR2 832 aaPredicted RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 ATAD3AQ9NVI7 634 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 RHPN2P1A8MT19 583 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 TEX28O15482 410 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 GRM5P41594 1212 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 GSSP48637 474 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 GALNT3Q14435 633 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 SF1Q15637 639 aaKnown RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 AFTPHQ6ULP2 937 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 NOA1Q8NC60 698 aaKnown RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 NDUFAF1Q9Y375 327 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 LRRC72A6NJI9 287 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 PCCBP05166 539 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 SLURP2P0DP57 97 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 SOX6P35712 828 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 SLC1A6P48664 564 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 ACAT2Q9BWD1 397 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.03■□□□□ -0
LRRK1-201ENST00000388948 A0A087X1B8 175 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 PER2O15055 1255 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 PTPN2P17706 415 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 CHST9Q7L1S5 443 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 NPAS4Q8IUM7 802 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 LENG1Q96BZ8 264 aaPredicted RBP15.03■□□□□ -0
LRRK1-201ENST00000388948 RNFT2Q96EX2 444 aa15.03■□□□□ -0
LRRK1-201ENST00000388948 LGR5O75473 907 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 FGRP09769 529 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 CRATP43155 626 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DLG4P78352 724 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 GPM6BQ13491 265 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 HSDL1Q3SXM5 330 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DAB2IPQ5VWQ8 1189 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 SCARA3Q6AZY7 606 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 FAM35AQ86V20 835 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 UPF1Q92900 1129 aaKnown RBP eCLIP15.02■□□□□ -0
LRRK1-201ENST00000388948 DPEP2Q9H4A9 486 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 ZFP14Q9HCL3 533 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 SLC12A4Q9UP95 1085 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 FSBPO95073 299 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 XKR6Q5GH73 641 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 C9orf57Q5W0N0 161 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 AVENQ9NQS1 362 aaPredicted RBP15.02■□□□□ -0
LRRK1-201ENST00000388948 RABGEF1Q9UJ41 708 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUSP12Q9UNI6 340 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 A0A1B0GW55 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 SIGLEC16A6NMB1 481 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 ATP9AO75110 1047 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 OR4Q2P0C623 313 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L2P0CJ85 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L3P0CJ86 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L4P0CJ87 422 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L5P0CJ88 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L6P0CJ89 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4L7P0CJ90 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 CORO1AP31146 461 aaKnown RBP15.02■□□□□ -0
LRRK1-201ENST00000388948 NUP62P37198 522 aaPredicted RBP15.02■□□□□ -0
LRRK1-201ENST00000388948 EARS2Q5JPH6 523 aaKnown RBP15.02■□□□□ -0
LRRK1-201ENST00000388948 FAM45BPQ6NSW5 357 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 MCEMP1Q8IX19 187 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 ATAD1Q8NBU5 361 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 SLC39A8Q9C0K1 460 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 DUX4Q9UBX2 424 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 SLC24A2Q9UI40 661 aa15.02■□□□□ -0
LRRK1-201ENST00000388948 NTRK1P04629 796 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 HOXB8P17481 243 aaPredicted RBP15.02□□□□□ -0.01
LRRK1-201ENST00000388948 BNC1Q01954 994 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 PCID2Q5JVF3 399 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 FAM151BQ6UXP7 276 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 ZNF248Q8NDW4 579 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 OR52K1Q8NGK4 314 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 ACTRT1Q8TDG2 376 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 ZNF780BQ9Y6R6 833 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 A0A1W2PQH9 124 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 MEIS2O14770 477 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 FAM98BQ52LJ0 330 aaKnown RBP15.02□□□□□ -0.01
LRRK1-201ENST00000388948 FIGNQ5HY92 759 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 TOP6BLQ8N6T0 577 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 ZBTB10Q96DT7 871 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 GOLGA2P5Q9HBQ8 144 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 TCF7L2Q9NQB0 619 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 KLHL1Q9NR64 748 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 ERAL1O75616 437 aaKnown RBP15.02□□□□□ -0.01
LRRK1-201ENST00000388948 SP2Q02086 613 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 GRM3Q14832 879 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 FUT10Q6P4F1 479 aa15.02□□□□□ -0.01
LRRK1-201ENST00000388948 TMEM26Q6ZUK4 368 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms