RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 ZBTB34Q8NCN2 500 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RP9Q8TA86 221 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF564Q8TBZ8 553 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MRGPRDQ8TDS7 321 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RNF128Q8TEB7 428 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TMEM159Q96B96 161 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZC3HAV1LQ96H79 300 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SEC16BQ96JE7 1060 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SPATA17Q96L03 361 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TTC14Q96N46 770 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HAUS7Q99871 368 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NRIP2Q9BQI9 281 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SYT15Q9BQS2 421 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RIOK1Q9BRS2 568 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 AMBRA1Q9C0C7 1298 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ST6GALNAC4Q9H4F1 302 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 AAMDCQ9H7C9 122 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ESM1Q9NQ30 184 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ABCF3Q9NUQ8 709 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FAM118AQ9NWS6 357 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 UCKL1Q9NWZ5 548 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CTTNBP2NLQ9P2B4 639 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CPNE7Q9UBL6 633 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 REV1Q9UBZ9 1251 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KLHL3Q9UH77 587 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 AGO1Q9UL18 857 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 INTUQ9ULD6 942 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SEC23IPQ9Y6Y8 1000 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 STRCP1A6NGW2 1772 aa-2.13□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LRRK2Q5S007 2527 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGSF9BQ9UPX0 1349 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ITPR2Q14571 2701 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 POGZQ7Z3K3 1410 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SRCAPQ6ZRS2 3230 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IGKV1D-8A0A087WSZ0 117 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 A8MWP4 228 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SHISA9B4DS77 424 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 EEF2KO00418 725 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZIC3O60481 467 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 VAMP4O75379 141 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MT-CO3P00414 261 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TSHBP01222 138 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IL6RP08887 468 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DLDP09622 509 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GAAP10253 952 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ACP2P11117 423 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TCF4P15884 667 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KCNA2P16389 499 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 MAGP20916 626 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 POLR2BP30876 1174 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CYP2C19P33261 490 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CRISP3P54108 245 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZP1P60852 638 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PITX1P78337 314 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DNM1Q05193 864 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SRSF6Q13247 344 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC39A6Q13433 755 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LARS2Q15031 903 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 DLGAP5Q15398 846 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SMAD1Q15797 465 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KRTAP6-2Q3LI66 62 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TOR2AQ5JU69 321 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KCNT1Q5JUK3 1230 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 YOD1Q5VVQ6 348 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 IQCEQ6IPM2 695 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FAM71E1Q6IPT2 247 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SCARA5Q6ZMJ2 495 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLC16A12Q6ZSM3 486 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 Q6ZSV7 163 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RNF44Q7L0R7 432 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OTOP3Q7RTS5 596 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TRPT1Q86TN4 253 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PALB2Q86YC2 1186 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PDSS2Q86YH6 399 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPSM1Q86YR5 675 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TMEM139Q8IV31 216 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ZNF695Q8IW36 515 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KIR3DL3Q8N743 410 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 STPG4Q8N801 248 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ABTB2Q8N961 1025 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 OR5AN1Q8NGI8 311 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GABPB2Q8TAK5 448 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 HPSE2Q8WWQ2 592 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 FCAMRQ8WWV6 532 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 RUFY2Q8WXA3 655 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TM9SF4Q92544 642 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 CEP95Q96GE4 821 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SENP7Q9BQF6 1050 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PAXXQ9BUH6 204 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GNL3Q9BVP2 549 aaKnown RBP eCLIP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 TM2D2Q9BX73 214 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 ALX4Q9H161 411 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NOL6Q9H6R4 1146 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 NPHS2Q9NP85 383 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 SLAMF7Q9NQ25 335 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 GPRC5CQ9NQ84 441 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 KLHL1Q9NR64 748 aa-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 LIMA1Q9UHB6 759 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1340P-201ENST00000384438 PRSS50Q9UI38 385 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms