RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PRKCGP05129 697 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 CERS1P27544 350 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 MLH1P40692 756 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 RPS13P62277 151 aaKnown RBP5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 KCTD2Q14681 263 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 PGM5Q15124 567 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 TOMM20Q15388 145 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 ME3Q16798 604 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 EARS2Q5JPH6 523 aaKnown RBP5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 FAM205BPQ63HN1 556 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 MOB3CQ70IA8 216 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 BRINP3Q76B58 766 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 RPAP2Q8IXW5 612 aaPredicted RBP5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 HDAC7Q8WUI4 952 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 KAT2AQ92830 837 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 FAM149B1Q96BN6 582 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 H2AFJQ9BTM1 129 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 TUBB6Q9BUF5 446 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 MUC13Q9H3R2 512 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 CXorf56Q9H5V9 222 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 CDH22Q9UJ99 828 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 ING1Q9UK53 422 aaPredicted RBP5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 UTS2RQ9UKP6 389 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 LAMP3Q9UQV4 416 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 KCNE2Q9Y6J6 123 aa5.75□□□□□ -1.49
RNU6-40P-201ENST00000384254 LRRC3CA6NJW4 275 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 FOXO6A8MYZ6 492 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 RNMTO43148 476 aaKnown RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 PRPF4O43172 522 aaKnown RBP eCLIP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 DOK2O60496 412 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 C1QL1O75973 258 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 NEURL1O76050 574 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 TUBB4AP04350 444 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 PCNAP12004 261 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 ZNF8P17098 575 aaPredicted RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 SLC16A2P36021 539 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 PPARGP37231 505 aaPredicted RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 RGS2P41220 211 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 FOXF2Q12947 444 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 RUNX2Q13950 521 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 MEA1Q16626 185 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 FBXO42Q6P3S6 717 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 ZNF793Q6ZN11 406 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 ZNF788Q6ZQV5 615 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 IKBIPQ70UQ0 350 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 DDIASQ8IXT1 998 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 POMGNT1Q8WZA1 660 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 SH2D3AQ9BRG2 576 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 PIMREGQ9BSJ6 248 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 HEMGNQ9BXL5 484 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 ITPAQ9BY32 194 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 PCED1AQ9H1Q7 454 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 SEPT11Q9NVA2 429 aaKnown RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 KLHL13Q9P2N7 655 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 ZNF70Q9UC06 446 aaPredicted RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 COL11A2P13942 1736 aaPredicted RBP5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 MST1RQ04912 1400 aa5.74□□□□□ -1.49
RNU6-40P-201ENST00000384254 A0A096LPK6 155 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TYW5A2RUC4 315 aaKnown RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 C17orf102A2RUQ5 167 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 A6NCN8 305 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 LDLRAD4O15165 306 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 PTP4A3O75365 173 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TSPAN9O75954 239 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 PTPN2P17706 415 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 PTGER1P34995 402 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 DPP6P42658 865 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 GPR12P47775 334 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 GABRB2P47870 512 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 OLR1P78380 273 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TFF2Q03403 129 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TMEM115Q12893 351 aaPredicted RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 CUL4AQ13619 759 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 PPP2R5BQ15173 497 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 DPCR1Q3MIW9 517 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 RILPL1Q5EBL4 403 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 MEX3CQ5U5Q3 659 aaKnown RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TMEM154Q6P9G4 183 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 RD3Q7Z3Z2 195 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 UBE2Q1Q7Z7E8 422 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 GGNQ86UU5 652 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TMC8Q8IU68 726 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 GALNT16Q8N428 558 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 FRMD1Q8N878 549 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 SCFD2Q8WU76 684 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TMEM170AQ8WVE7 144 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 USP6NLQ92738 828 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 INTS12Q96CB8 462 aaKnown RBP5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 CHFRQ96EP1 664 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 PDGFCQ9NRA1 345 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 RNF146Q9NTX7 359 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 TMEM45AQ9NWC5 275 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 HCFC1R1Q9NWW0 138 aa5.73□□□□□ -1.49
RNU6-40P-201ENST00000384254 HSPB7Q9UBY9 170 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms