RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TEX51A0A1B0GUA7 166 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 K7ESM1 405 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 PES1O00541 588 aaKnown RBP23.56■■□□□ 1.36
U2AF1-202ENST00000380276 GIMD1P0DJR0 217 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 CCNHP51946 323 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-202ENST00000380276 TMEM259Q4ZIN3 620 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 C2CD6Q53TS8 623 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 CARD16Q5EG05 197 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 KIAA1161Q6NSJ0 714 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 KYAT3Q6YP21 454 aaKnown RBP23.56■■□□□ 1.36
U2AF1-202ENST00000380276 PCDH20Q8N6Y1 951 aaKnown RBP23.56■■□□□ 1.36
U2AF1-202ENST00000380276 FAM174AQ8TBP5 190 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 PGAP3Q96FM1 320 aaPredicted RBP23.56■■□□□ 1.36
U2AF1-202ENST00000380276 IFT43Q96FT9 208 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 BMFQ96LC9 184 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 C1orf74Q96LT6 269 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 TM6SF2Q9BZW4 377 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 ZYG11BQ9C0D3 744 aa23.56■■□□□ 1.36
U2AF1-202ENST00000380276 ASXL3Q9C0F0 2248 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 ILVBLA1L0T0 632 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 CPED1A4D0V7 1026 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 POM121BA6NF01 834 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 NEMP1O14524 444 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 SCAMP1O15126 338 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 C1QL1O75973 258 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 PRKCSHP14314 528 aaPredicted RBP23.55■■□□□ 1.36
U2AF1-202ENST00000380276 ITGB7P26010 798 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 SGCGQ13326 291 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 MAN2A1Q16706 1144 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 TAF1BQ53T94 588 aaPredicted RBP23.55■■□□□ 1.36
U2AF1-202ENST00000380276 FAM131BQ86XD5 332 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 XYLT1Q86Y38 959 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 LSMEM2Q8N112 164 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 MSANTD4Q8NCY6 345 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 CFAP57Q96MR6 1250 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 ZNF578Q96N58 590 aaPredicted RBP23.55■■□□□ 1.36
U2AF1-202ENST00000380276 CEP44Q9C0F1 390 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 FADS3Q9Y5Q0 445 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 HS3ST3A1Q9Y663 406 aa23.55■■□□□ 1.36
U2AF1-202ENST00000380276 FPGTO14772 594 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 RAD51BO15315 384 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 L1CAMP32004 1257 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 FLT3P36888 993 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 GNA12Q03113 381 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 PDE1CQ14123 709 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-202ENST00000380276 FGL2Q14314 439 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 DRAP1Q14919 205 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-202ENST00000380276 CDKN3Q16667 212 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 ACBD5Q5T8D3 534 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-202ENST00000380276 CDCP2Q5VXM1 449 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 PARS2Q7L3T8 475 aaKnown RBP23.54■■□□□ 1.36
U2AF1-202ENST00000380276 PARGQ86W56 976 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 IRF2BP1Q8IU81 584 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 FAM71AQ8IYT1 594 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 ZNF548Q8NEK5 533 aaPredicted RBP23.54■■□□□ 1.36
U2AF1-202ENST00000380276 OR6K2Q8NGY2 324 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 LMX1AQ8TE12 382 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 NT5C3BQ969T7 300 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 ACTL7AQ9Y615 435 aa23.54■■□□□ 1.36
U2AF1-202ENST00000380276 IGLV3-10A0A075B6K4 115 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 GP1BAP07359 652 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 CYP11B1P15538 503 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 RABIFP47224 123 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 ARF5P84085 180 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 SLC20A2Q08357 652 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 FZD2Q14332 565 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 DEFB133Q30KQ1 61 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 HSP90AA4PQ58FG1 418 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 C3orf38Q5JPI3 329 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 ZCCHC8Q6NZY4 707 aaKnown RBP23.53■■□□□ 1.36
U2AF1-202ENST00000380276 ZNF783Q6ZMS7 281 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 FAM114A1Q8IWE2 563 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 HAPLN3Q96S86 360 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 USP29Q9HBJ7 922 aa23.53■■□□□ 1.36
U2AF1-202ENST00000380276 BPTFQ12830 3046 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 IGLON5A6NGN9 336 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 ZNF821O75541 412 aaPredicted RBP23.52■■□□□ 1.36
U2AF1-202ENST00000380276 CSF2P04141 144 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 GKP32189 559 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 SCNN1AP37088 669 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 GABRB2P47870 512 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 TMPRSS3P57727 454 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 ATP11AP98196 1134 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 ARHGAP40Q5TG30 622 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 RWDD4Q6NW29 188 aaKnown RBP23.52■■□□□ 1.36
U2AF1-202ENST00000380276 CRTC1Q6UUV9 634 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 EFL1Q7Z2Z2 1120 aaKnown RBP23.52■■□□□ 1.36
U2AF1-202ENST00000380276 ZNF605Q86T29 641 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 FAM181AQ8N9Y4 354 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 LSM14AQ8ND56 463 aaKnown RBP23.52■■□□□ 1.36
U2AF1-202ENST00000380276 KCNE4Q8WWG9 221 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 NDST4Q9H3R1 872 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 POLR1BQ9H9Y6 1135 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 CPNE5Q9HCH3 593 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 TMEM51Q9NW97 253 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 ITM2BQ9Y287 266 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 FHOD1Q9Y613 1164 aa23.52■■□□□ 1.36
U2AF1-202ENST00000380276 TRPM6Q9BX84 2022 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 LY6G6EA0A0G2JKS1 128 aa23.51■■□□□ 1.35
U2AF1-202ENST00000380276 SPTY2D1-AS1A0A0U1RR47 76 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms