RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NUP50Q9UKX7 468 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PSME2Q9UL46 239 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 RLFQ13129 1914 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TEX51A0A1B0GUA7 166 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 I3L4J1 428 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 LINC01387J3KSC0 135 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CXCL11O14625 94 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 HTRA2O43464 458 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MTA2O94776 668 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PAHP00439 452 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GNAO1P09471 354 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 XRCC1P18887 633 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 NR2F2P24468 414 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GSTM2P28161 218 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 EEF1DP29692 281 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CYP2C18P33260 490 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MSX2P35548 267 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 LEPRP48357 1165 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GMPSP49915 693 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 TMPRSS15P98073 1019 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 OCA2Q04671 838 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KCNA1Q09470 495 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 NEDD8Q15843 81 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 SLC9A4Q6AI14 798 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ADGRD1Q6QNK2 874 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KCNK18Q7Z418 384 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GRPEL2Q8TAA5 225 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CHAC2Q8WUX2 184 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PIK3R3Q92569 461 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MARC2Q969Z3 335 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 KLHL32Q96NJ5 620 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 MTG1Q9BT17 334 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 SEMA6AQ9H2E6 1030 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 ADNPQ9H2P0 1102 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 DPEP3Q9H4B8 488 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 IFT22Q9H7X7 185 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 GPN2Q9H9Y4 310 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PPCSQ9HAB8 311 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 DNAJC28Q9NX36 388 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 DUS2Q9NX74 493 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PKD2L2Q9NZM6 624 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PKD2L1Q9P0L9 805 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 IP6K2Q9UHH9 426 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 CPSF3Q9UKF6 684 aaKnown RBP7.59□□□□□ -1.19
CDKL5-201ENST00000379989 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 PCDHGA10Q9Y5H3 936 aa7.59□□□□□ -1.19
CDKL5-201ENST00000379989 WDR90Q96KV7 1748 aa7.59□□□□□ -1.2
CDKL5-201ENST00000379989 LOC100653049A0A140TA62 436 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 KRT34O76011 436 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 SLC25A27O95847 323 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 NR3C1P04150 777 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 GFAPP14136 432 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ATF6P18850 670 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 PIK3R1P27986 724 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ADSSP30520 456 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 HTR2BP41595 481 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ALDH7A1P49419 539 aaKnown RBP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ATN1P54259 1190 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 TNK2Q07912 1038 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 TARDBPQ13148 414 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 KIZQ2M2Z5 673 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 TEX44Q53QW1 395 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 NHSL2Q5HYW2 709 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ATAD3CQ5T2N8 411 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 DCUN1D2Q6PH85 259 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ENOSF1Q7L5Y1 443 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ZNF720Q7Z2F6 126 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 SNX32Q86XE0 403 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 GALNT12Q8IXK2 581 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 AFAP1L2Q8N4X5 818 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 OR13F1Q8NGS4 319 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 AFG1LQ8WV93 481 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 MAGED4Q96JG8 741 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 FAM124BQ9H5Z6 455 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 SLA2Q9H6Q3 261 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 ACAD9Q9H845 621 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 GPBP1L1Q9HC44 474 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 HACL1Q9UJ83 578 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 DGKBQ9Y6T7 804 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 AKAP10O43572 662 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 PI15O43692 258 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 IL18RAPO95256 599 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 SNRPAP09012 282 aaKnown RBP7.58□□□□□ -1.2
CDKL5-201ENST00000379989 PTPRAP18433 802 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 FGFR3P22607 806 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 L1CAMP32004 1257 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 STAT1P42224 750 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 GPX6P59796 221 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 JAG1P78504 1218 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 MS4A2Q01362 244 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 MTMR1Q13613 665 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 Q5BKY6 102 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 KCNT1Q5JUK3 1230 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 CATSPERGQ6ZRH7 1159 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 FAM178BQ8IXR5 827 aa7.58□□□□□ -1.2
CDKL5-201ENST00000379989 LINC00518Q8N0U6 118 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms