RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FNTAP49354 379 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PER3P56645 1201 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TGM3Q08188 693 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PRRT3Q5FWE3 981 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SH2D4BQ5SQS7 431 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 LINGO4Q6UY18 593 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CLYBLQ8N0X4 340 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TOP6BLQ8N6T0 577 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ARL10Q8N8L6 244 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ACTRT1Q8TDG2 376 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 C2orf15Q8WU43 125 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MCUR1Q96AQ8 359 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 KCNMB3Q9NPA1 279 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GDE1Q9NZC3 331 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ZFP37Q9Y6Q3 630 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CHD4Q14839 1912 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TOGARAM1Q9Y4F4 1720 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TCP11X1B4DZS4 312 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ANKRD63C9JTQ0 380 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CFLARO15519 480 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CALCAP01258 141 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 UBTFL6P0CB48 400 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SPATA31C1P0DKV0 1188 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GFAPP14136 432 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TYMPP19971 482 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MARCKSL1P49006 195 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ADCY2Q08462 1091 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SPIRE1Q08AE8 756 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 LONRF1Q17RB8 773 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PLA2G4EQ3MJ16 856 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PLEKHG4Q58EX7 1191 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PIK3R6Q5UE93 754 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TIGD7Q6NT04 549 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 LRIG3Q6UXM1 1119 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 DET1Q7L5Y6 550 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TRPM8Q7Z2W7 1104 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 UNC93AQ86WB7 457 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RHOT2Q8IXI1 618 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 LRRC52Q8N7C0 313 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 OR10Q1Q8NGQ4 319 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 EPS8L3Q8TE67 593 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 REXO5Q96IC2 774 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 FAM84AQ96KN4 292 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ERP44Q9BS26 406 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 BATF3Q9NR55 127 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MTMR10Q9NXD2 777 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RRN3Q9NYV6 651 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 UBP1Q9NZI7 540 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ZFATQ9P243 1243 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SCOCQ9UIL1 159 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PNMA8BQ9ULN7 279 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TRAF3IP3Q9Y228 551 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MYBPHLA2RUH7 354 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GOLGA8MH3BSY2 632 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SHOX2O60902 331 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SHBGP04278 402 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TMEM253P0C7T8 217 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CUL3Q13618 768 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 XKR4Q5GH76 650 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MCEMP1Q8IX19 187 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF655Q8N720 491 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SPPL3Q8TCT6 385 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 KRT35Q92764 455 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RERGQ96A58 199 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 JSRP1Q96MG2 331 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 APOL2Q9BQE5 337 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TRAIPQ9BWF2 469 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RSPH9Q9H1X1 276 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ELAC1Q9H777 363 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 FBRSL1Q9HCM7 1045 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CYP4F12Q9HCS2 524 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 HOMER3Q9NSC5 361 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 KLQ9UEF7 1012 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SQORQ9Y6N5 450 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GRXCR2A6NFK2 248 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TM7SF2O76062 418 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TGM2P21980 687 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 CASRP41180 1078 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GRIA2P42262 883 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 EIF3BP55884 814 aaKnown RBP6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TAS2R50P59544 299 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 OCA2Q04671 838 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 GKN2Q86XP6 184 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 EXD1Q8NHP7 514 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 MIPOL1Q8TD10 442 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 RXFP2Q8WXD0 754 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 TATDN2Q93075 761 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 ACBD6Q9BR61 282 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 SEMA4AQ9H3S1 761 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 HCFC1R1Q9NWW0 138 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
NEDD9-202ENST00000379446 PIPSLA2A3N6 862 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 TIMM44O43615 452 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ASLP04424 464 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CTPS1P17812 591 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms