RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 GKN1Q9NS71 199 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 BAIAP2L1Q9UHR4 511 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 PFDN2Q9UHV9 154 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 HS3ST4Q9Y661 456 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 E9PAM4 449 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TCEA3O75764 348 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CABYRO75952 493 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 YWHAQP27348 245 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CPA2P48052 419 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TLE2Q04725 743 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 MGAT5Q09328 741 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 LDB1Q86U70 411 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 RIBC1Q8N443 379 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CNTD1Q8N815 330 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PDCD6IPQ8WUM4 868 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 SGF29Q96ES7 293 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TRPC7Q9HCX4 862 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 FBXO6Q9NRD1 293 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TUBA8Q9NY65 449 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 MARCH2Q9P0N8 246 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ARMCX1Q9P291 453 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 DKK3Q9UBP4 350 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TDRD15B5MCY1 1934 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 A0A0U1RQS6 177 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 KLHL41O60662 606 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 LYPLA1O75608 230 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 VAPBO95292 243 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 SKIP12755 728 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 FUT4P22083 530 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 NMBRP28336 390 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PAPOLAP51003 745 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 KCNJ2P63252 427 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 NR1H3Q13133 447 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 XRCC4Q13426 336 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 SEMA5AQ13591 1074 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PARP6Q2NL67 630 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 LGSNQ5TDP6 509 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 NCCRP1Q6ZVX7 275 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 NUDCD3Q8IVD9 361 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 BANPQ8N9N5 519 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 BCL7CQ8WUZ0 217 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CDKL2Q92772 493 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 FAM124BQ9H5Z6 455 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ECT2Q9H8V3 914 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 STK39Q9UEW8 545 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 HAO1Q9UJM8 370 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 SLC39A10Q9ULF5 831 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 GOLGA4Q13439 2230 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 FAM237BA0A1B0GVD1 139 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PHGDHO43175 533 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 BNIP3LO60238 219 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 POLBP06746 335 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 HAPLN1P10915 354 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ACTN3Q08043 901 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TRIM60Q495X7 471 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PIGWQ7Z7B1 504 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ARID3BQ8IVW6 561 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ACVR1CQ8NER5 493 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ST13P5Q8NFI4 369 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CCT6BQ92526 530 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 SEPT8Q92599 483 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 MAELQ96JY0 434 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 MLPHQ9BV36 600 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TSSK1BQ9BXA7 367 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CYP4F11Q9HBI6 524 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 TSR3Q9UJK0 312 aaKnown RBP10.97□□□□□ -0.65
NEDD9-201ENST00000379433 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
NEDD9-201ENST00000379433 NDC80O14777 642 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 TLR5O60602 858 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 MX2P20592 715 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 FDFT1P37268 417 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 SERPINB4P48594 390 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.65
NEDD9-201ENST00000379433 RCN2Q14257 317 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 PRKD1Q15139 912 aaPredicted RBP10.96□□□□□ -0.65
NEDD9-201ENST00000379433 MAP3K21Q5TCX8 1036 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 PIK3R6Q5UE93 754 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 C6orf89Q6UWU4 347 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 PSTKQ8IV42 348 aaKnown RBP10.96□□□□□ -0.65
NEDD9-201ENST00000379433 TRIML2Q8N7C3 387 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.65
NEDD9-201ENST00000379433 PSMG2Q969U7 264 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 KLHL29Q96CT2 875 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 MYEOVQ96EZ4 313 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 RILPQ96NA2 401 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 FTHL17Q9BXU8 183 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 SLC2A6Q9UGQ3 507 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 IPO11Q9UI26 975 aaKnown RBP10.96□□□□□ -0.65
NEDD9-201ENST00000379433 ARL2BPQ9Y2Y0 163 aa10.96□□□□□ -0.65
NEDD9-201ENST00000379433 FIS1Q9Y3D6 152 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms