RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CDH9Q9ULB4 789 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 TRIM3O75382 744 aaPredicted RBP11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 MMP13P45452 471 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 ARF3P61204 181 aaPredicted RBP11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 ARF1P84077 181 aaKnown RBP11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 BCL2L1Q07817 233 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 CBX3Q13185 183 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 NDUFA9Q16795 377 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 SWI5Q1ZZU3 235 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 COLEC12Q5KU26 742 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 PDPK2PQ6A1A2 396 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
PTCHD1-201ENST00000379361 LOC110117498-PIK3R3F6TDL0 507 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LDLRP01130 860 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LTFP02788 710 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CYP1A1P04798 512 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 PIK3R3Q92569 461 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ITGB1BP2Q9UKP3 347 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 BARX2Q9UMQ3 279 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CBX2Q14781 532 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 HLFQ16534 295 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 PRDM8Q9NQV8 689 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 AASDHPPTQ9NRN7 309 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CDH7Q9ULB5 785 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF510Q9Y2H8 683 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 GMEB1Q9Y692 573 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 FTH1P02794 183 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ANKFN1Q8N957 763 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 UNKQ9C0B0 810 aaKnown RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CPVLQ9H3G5 476 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LOC100506127A0A0U1RQW1 187 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 DCLK1O15075 740 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CBFA2T3O75081 653 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 PTPN9P43378 593 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ZCCHC12Q6PEW1 402 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TMEM176AQ96HP8 235 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 NOX1Q9Y5S8 564 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 EPHX2P34913 555 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TEFMQ96QE5 360 aaKnown RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MAT2BQ9NZL9 334 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 HEY2Q9UBP5 337 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 O00370 1275 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CHST10O43529 356 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CYP11B1P15538 503 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MAPK8P45983 427 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ELOAQ14241 798 aaKnown RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CRY1Q16526 586 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 CPB2Q96IY4 423 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 SENP6Q9GZR1 1112 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MARCH2Q9P0N8 246 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 NDUFB10O96000 172 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MAPK11Q15759 364 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ZC3H7AQ8IWR0 971 aaKnown RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LGI2Q8N0V4 545 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ARHGEF5Q12774 1597 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MDM4O15151 490 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TTPAP49638 278 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM153CQ494X1 144 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 BICRALQ6AI39 1079 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 POLR1EQ9GZS1 481 aaKnown RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 DEFB129Q9H1M3 183 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 GRIK4Q16099 956 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 OTUD3Q5T2D3 398 aaPredicted RBP11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 GPR158Q5T848 1215 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TREML1Q86YW5 311 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 LPCAT1Q8NF37 534 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ACOT12Q8WYK0 555 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 HIST1H2AAQ96QV6 131 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 FANCMQ8IYD8 2048 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 NDUFV1P49821 464 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 SPIRE1Q08AE8 756 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 MPZL3Q6UWV2 235 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 ANKZF1Q9H8Y5 726 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 DAPK2Q9UIK4 370 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 COLEC10Q9Y6Z7 277 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 FCHO1O14526 889 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 NELL1Q92832 810 aa11.35□□□□□ -0.59
PTCHD1-201ENST00000379361 PGRMC2O15173 223 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 RPA1P27694 616 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SPANXN3Q5MJ09 141 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 TFAP2DQ7Z6R9 452 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 JSRP1Q96MG2 331 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SEPHS2Q99611 448 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 HGH1Q9BTY7 390 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms