RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RBM22Q9NW64 420 aaKnown RBP eCLIP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 DCTN4Q9UJW0 460 aa10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
POLR2J3-201ENST00000379340 TCF20Q9UGU0 1960 aaKnown RBP10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 DRGXA6NNA5 263 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 KIAA0355O15063 1070 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 CHUKO15111 745 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SIN3BO75182 1162 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 CXCL10P02778 98 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 PROCP04070 461 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SERPINE1P05121 402 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 GALTP07902 379 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 ZDHHC11BP0C7U3 371 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC8A1P32418 973 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 PRKAA2P54646 552 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 YBEYP58557 167 aaPredicted RBP10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 ZBTB16Q05516 673 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 GPNMBQ14956 572 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 KRT72Q14CN4 511 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 TBCCQ15814 346 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MGAT5BQ3V5L5 792 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 PARP15Q460N3 678 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 TAF1BQ53T94 588 aaPredicted RBP10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 HSP90AA5PQ58FG0 334 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SDHAF4Q5VUM1 108 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MBLAC2Q68D91 279 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 FSTL4Q6MZW2 842 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 CES3Q6UWW8 571 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 C16orf59Q7L2K0 433 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MTDHQ86UE4 582 aaKnown RBP10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 ATAD1Q8NBU5 361 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 PDZD8Q8NEN9 1154 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 IPMKQ8NFU5 416 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MFSD3Q96ES6 412 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 RANBP9Q96S59 729 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 TTPALQ9BTX7 342 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MECRQ9BV79 373 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 FICDQ9BVA6 458 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 TTLL2Q9BWV7 592 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 FSD1LQ9BXM9 530 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 RHOJQ9H4E5 214 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SP110Q9HB58 689 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 ARNT2Q9HBZ2 717 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 CHRAC1Q9NRG0 131 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 MARCH2Q9P0N8 246 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC17A6Q9P2U8 582 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 HEY2Q9UBP5 337 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 NUDT5Q9UKK9 219 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 EMCNQ9ULC0 261 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 RPL26L1Q9UNX3 145 aaKnown RBP10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 TCAF1Q9Y4C2 921 aa10.63□□□□□ -0.71
POLR2J3-201ENST00000379340 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 CCDC22O60826 627 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 WFS1O76024 890 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 ATP6V1G2O95670 118 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 CLTBP09497 229 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 MYL2P10916 166 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 COL6A2P12110 1019 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 NMBRP28336 390 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 PTPN4P29074 926 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 KCNJ2P63252 427 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 FPGSQ05932 587 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 TAF10Q12962 218 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 C10orf120Q5SQS8 335 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 C1orf53Q5VUE5 145 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 KIAA0930Q6ICG6 404 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 DENND5AQ6IQ26 1287 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 RANBP10Q6VN20 620 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 CLEC14AQ86T13 490 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 WDR75Q8IWA0 830 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 CRIPAKQ8N1N5 446 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 TEX26Q8N6G2 289 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 SPATA22Q8NHS9 363 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 RDH11Q8TC12 318 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 PPP4R1Q8TF05 950 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 VPS39Q96JC1 886 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 GPR22Q99680 433 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 SEPT5Q99719 369 aaPredicted RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 APOL2Q9BQE5 337 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 FAM167BQ9BTA0 163 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 NOL6Q9H6R4 1146 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 IARS2Q9NSE4 1012 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 NDFIP2Q9NV92 336 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 UBP1Q9NZI7 540 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 MPP6Q9NZW5 540 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 HSFX1Q9UBD0 423 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 COPG2Q9UBF2 871 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 SORCS3Q9UPU3 1222 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 MIA3Q5JRA6 1907 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
POLR2J3-201ENST00000379340 CCDC195A0A1B0GUA6 201 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC12A8A0AV02 714 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 HEATR9A2RTY3 570 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 450.7 ms