RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 KLHDC10Q6PID8 442 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 ATPAF2Q8N5M1 289 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 TMEM174Q8WUU8 243 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 CDCA5Q96FF9 252 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 GAD1Q99259 594 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
SEC23B-204ENST00000377475 E7ENX8 843 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 RNASEH2AO75792 299 aaKnown RBP11.71□□□□□ -0.53
SEC23B-204ENST00000377475 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 AHSGP02765 367 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 SLC7A2P52569 658 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 LIMK2P53671 638 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
SEC23B-204ENST00000377475 RBM20Q5T481 1227 aaKnown RBP11.71□□□□□ -0.53
SEC23B-204ENST00000377475 TMEM110Q86TL2 294 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 MIB1Q86YT6 1006 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 FAM47BQ8NA70 645 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 DNAJB14Q8TBM8 379 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 FAM110BQ8TC76 370 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 BLOC1S5Q8TDH9 187 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 BHMTQ93088 406 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 MORF4L1Q9UBU8 362 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 PSMD13Q9UNM6 376 aa11.71□□□□□ -0.53
SEC23B-204ENST00000377475 GIPC1O14908 333 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 B3GAT3O94766 335 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 ENDOD1O94919 500 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 C1QAP02745 245 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 PCNAP12004 261 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 GFAPP14136 432 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 CCDC153Q494R4 210 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 CNSTQ6PJW8 725 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 GPRIN1Q7Z2K8 1008 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 CEP97Q8IW35 865 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 LPGAT1Q92604 370 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 JADE3Q92613 823 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 WNT8BQ93098 351 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 HSPBAP1Q96EW2 488 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 FAM192AQ9GZU8 254 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 TMEM165Q9HC07 324 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 NT5MQ9NPB1 228 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 COPG1Q9Y678 874 aaKnown RBP11.71□□□□□ -0.54
SEC23B-204ENST00000377475 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.545e-6■■■■■ 63.2
SEC23B-204ENST00000377475 ATAD5Q96QE3 1844 aa11.71□□□□□ -0.54
SEC23B-204ENST00000377475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 UBDO15205 165 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 LRIG2O94898 1065 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 ADRA1BP35368 520 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 PPARGP37231 505 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 IREB2P48200 963 aaKnown RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 TUBB3Q13509 450 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SLC25A52Q3SY17 297 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 OSTM1Q86WC4 334 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 ZFP28Q8NHY6 868 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SCAMP5Q8TAC9 235 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 KLHL32Q96NJ5 620 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 LRRC14BA6NHZ5 514 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 TIMM44O43615 452 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 DLX3O60479 287 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SIX3O95343 332 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 GSRP00390 522 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 TSHRP16473 764 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 CNTFP26441 200 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 ZNF789Q5FWF6 425 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SLC26A9Q7LBE3 791 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 NCKIPSDQ9NZQ3 722 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 FZD10Q9ULW2 581 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 KIAA1217Q5T5P2 1943 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 MRASO14807 208 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 TADA2AO75478 443 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 NCK1P16333 377 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 PCSK6P29122 969 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 RPL5P46777 297 aaKnown RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 YWHAHQ04917 246 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SPANXN3Q5MJ09 141 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SLC27A1Q6PCB7 646 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 EPGNQ6UW88 154 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 PLPPR4Q7Z2D5 763 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 SPPL2CQ8IUH8 684 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 EXOC8Q8IYI6 725 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 CPNE9Q8IYJ1 553 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 HEXDCQ8WVB3 486 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 TUBGCP3Q96CW5 907 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 BRD8Q9H0E9 1235 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
SEC23B-204ENST00000377475 COL4A5P29400 1685 aa11.69□□□□□ -0.54
SEC23B-204ENST00000377475 INPP4BO15327 924 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms