RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TSTD1Q8NFU3 115 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM111AQ96PZ2 611 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 NSUN3Q9H649 340 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TMLHEQ9NVH6 421 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 SPASTQ9UBP0 616 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC13A4Q9UKG4 626 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TTC28Q96AY4 2481 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 LIASO43766 372 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 KDM1AO60341 852 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 AGTP01019 485 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CFIP05156 583 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 APOA4P06727 396 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ADH5P11766 374 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CD151P48509 253 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CDH4P55283 916 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 HDAC4P56524 1084 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PPP2R2AP63151 447 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 MBLAC2Q68D91 279 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TRIM68Q6AZZ1 485 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 LEMD2Q8NC56 503 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 HDAC10Q969S8 669 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ARL8AQ96BM9 186 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 C8orf48Q96LL4 319 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 KLHL32Q96NJ5 620 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PAFAH2Q99487 392 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CCDC3Q9BQI4 270 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC4A5Q9BY07 1137 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 RAI2Q9Y5P3 530 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 COL4A5P29400 1685 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 LRP5O75197 1615 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 MYH8P13535 1937 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TRIM43BA6NCK2 446 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 HIDE1A8MVS5 230 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 LEFTY2O00292 366 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PHGDHO43175 533 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TCF4P15884 667 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 HSD17B3P37058 310 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 RFX3P48380 749 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TEX44Q53QW1 395 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SNAP47Q5SQN1 464 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 C9orf50Q5SZB4 431 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TXNRD3NBQ6F5E7 133 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC39A11Q8N1S5 342 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TRIM43Q96BQ3 446 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SERAC1Q96JX3 654 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ATP6V1G3Q96LB4 118 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ZIM3Q96PE6 472 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM167BQ9BTA0 163 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CXCL16Q9H2A7 254 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PABPC3Q9H361 631 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 NMUR1Q9HB89 426 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 WHRNQ9P202 907 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 GRID1Q9ULK0 1009 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 INVSQ9Y283 1065 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ADAM12O43184 909 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 COCHO43405 550 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SKAP2O75563 359 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 OR56A5P0C7T3 313 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CD72P21854 359 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 GUCY1A3Q02108 690 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 STX3Q13277 289 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PTK2BQ14289 1009 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PTPRNQ16849 979 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 RHBDF2Q6PJF5 856 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PPWD1Q96BP3 646 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SIPA1Q96FS4 1042 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SFXN1Q9H9B4 322 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 GLOD4Q9HC38 313 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 POLMQ9NP87 494 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CA14Q9ULX7 337 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SIPA1L3O60292 1781 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 GSTA4O15217 222 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TIMM44O43615 452 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CDK14O94921 469 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 NPY2RP49146 381 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ERVFC1P60507 584 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CTBP1Q13363 440 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PARP15Q460N3 678 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CERCAMQ5T4B2 595 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 Q6ZVU0 165 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 GPRIN1Q7Z2K8 1008 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CAMK1DQ8IU85 385 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 BBS7Q8IWZ6 715 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 FNIP1Q8TF40 1166 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 ELMO1Q92556 727 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 CASD1Q96PB1 797 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 SLC39A8Q9C0K1 460 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 FBXO6Q9NRD1 293 aaPredicted RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 TAS2R13Q9NYV9 303 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 MTRRQ9UBK8 725 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 KLHL3Q9UH77 587 aa8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 DDX60Q8IY21 1712 aaKnown RBP8.57□□□□□ -1.04
CRNKL1-202ENST00000377340 MYH7P12883 1935 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms