RNA–Protein interactions for RNA: ENST00000377255.3

ZKSCAN3-203, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-203ENST00000377255 PRRT2Q7Z6L0 340 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 RNF148Q8N7C7 305 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 DIS3LQ8TF46 1054 aaKnown RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 FGF1P05230 155 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 HTR7P34969 479 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 TRPC1P48995 793 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 NCALDP61601 193 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 VAC14Q08AM6 782 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 STARD3Q14849 445 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 VSTM1Q6UX27 236 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 CCDC149Q6ZUS6 474 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 PTGR2Q8N8N7 351 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 KCTD4Q8WVF5 259 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 IRGQQ8WZA9 623 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 TFAP2BQ92481 460 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 COPS7BQ9H9Q2 264 aaPredicted RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 MPP6Q9NZW5 540 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 RGSL1A5PLK6 1076 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 SAC3D1A6NKF1 404 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 ZBTB14O43829 449 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 WNT3AP56704 352 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 FBXW4P57775 412 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 USP41Q3LFD5 358 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 GLOD4Q9HC38 313 aa12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
ZKSCAN3-203ENST00000377255 SHOX2O60902 331 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 BPGMP07738 259 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 COX4I1P13073 169 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 KCNJ2P63252 427 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CDK18Q07002 472 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TRAF2Q12933 501 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SQLEQ14534 574 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CCDC81Q6ZN84 652 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SYTL1Q8IYJ3 562 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 GOLGA2P5Q9HBQ8 144 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SPG21Q9NZD8 308 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 LGALS13Q9UHV8 139 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TRIM17Q9Y577 477 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 PAGE1O75459 146 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 MLYCDO95822 493 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 LRPAP1P30533 357 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 GBE1Q04446 702 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 B4GALNT2Q8NHY0 566 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 AGAP11Q8TF27 550 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 STARD8Q92502 1023 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 HNRNPABQ99729 332 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SNTNA6NMZ2 147 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 DHX15O43143 795 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 PAPSS1O43252 624 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SNRPD1P62314 119 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CRY1Q16526 586 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TDRPQ86YL5 185 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 RP9Q8TA86 221 aaKnown RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 LRRN4Q8WUT4 740 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 MIEF1Q9NQG6 463 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TRAFD1O14545 582 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TLR5O60602 858 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 HDCP19113 662 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CRHR1P34998 444 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 IL27RAQ6UWB1 636 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CYP4Z1Q86W10 505 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 REPS1Q96D71 796 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 FBXL18Q96ME1 805 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 C9orf16Q9BUW7 83 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SEMA4BQ9NPR2 832 aaPredicted RBP12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SLC17A7Q9P2U7 560 aa12.89□□□□□ -0.35
ZKSCAN3-203ENST00000377255 C5orf60A6NFR6 353 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TREHO43280 583 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 EFCAB14O75071 495 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 EPB42P16452 691 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 ATP6V0D1P61421 351 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 CREMQ03060 361 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TGM3Q08188 693 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
ZKSCAN3-203ENST00000377255 DSG4Q86SJ6 1040 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms