RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TYW3Q6IPR3 259 aaKnown RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 ASB2Q96Q27 587 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 NDNQ99608 321 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 L2HGDHQ9H9P8 463 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 DUSP12Q9UNI6 340 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 ZNF711Q9Y462 761 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 ATP13A4Q4VNC1 1196 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 STAG3L4Q8TBR4 150 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 CENPTQ96BT3 561 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 FUCA2Q9BTY2 467 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TLR10Q9BXR5 811 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 CCDC167Q9P0B6 97 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 PPIEQ9UNP9 301 aaKnown RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 DERAQ9Y315 318 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 APODP05090 189 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 CXCR2P25025 360 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 IL5RAQ01344 420 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 CNSTQ6PJW8 725 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 OR6A2O95222 327 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 GSSP48637 474 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 PPIGQ13427 754 aaKnown RBP eCLIP13.77□□□□□ -0.21e-18■■■□□ 16.3
GPC6-201ENST00000377047 KIAA2013Q8IYS2 634 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 LNX1Q8TBB1 728 aaPredicted RBP13.77□□□□□ -0.2
GPC6-201ENST00000377047 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.2
GPC6-201ENST00000377047 SNX6Q9UNH7 406 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 ISM1B1AKI9 464 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 CHURC1-FNTBB4DL54 471 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 SOX6P35712 828 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 MATKP42679 507 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 ATL1Q8WXF7 558 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 RPTORQ8N122 1335 aa13.77□□□□□ -0.2
GPC6-201ENST00000377047 MRASO14807 208 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 ELFN1P0C7U0 828 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 HNF4AP41235 474 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 MON1AQ86VX9 555 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 PROX1Q92786 737 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 GLMNQ92990 594 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 UBE2E3Q969T4 207 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 FUT8Q9BYC5 575 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 RAD21L1Q9H4I0 556 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
GPC6-201ENST00000377047 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.21
GPC6-201ENST00000377047 EPN2O95208 641 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 CDK7P50613 346 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 ZNHIT3Q15649 155 aaPredicted RBP13.77□□□□□ -0.21
GPC6-201ENST00000377047 CASP12Q6UXS9 341 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 CNGB3Q9NQW8 809 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 PLK2Q9NYY3 685 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 OR10H2O60403 315 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 ECM1Q16610 540 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 CRTC3Q6UUV7 619 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 NETO2Q8NC67 525 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 LRRC39Q96DD0 335 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 ADI1Q9BV57 179 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 ARHGAP28Q9P2N2 729 aa13.77□□□□□ -0.21
GPC6-201ENST00000377047 CACNB4O00305 520 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 MSI1O43347 362 aaKnown RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 SGTAO43765 313 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 LIASO43766 372 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 SERPINB3P29508 390 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 RTP1P59025 263 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FMO1Q01740 532 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 TAF10Q12962 218 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 TCHHL1Q5QJ38 904 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 EID3Q8N140 333 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 TBCDQ9BTW9 1192 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 NOD2Q9HC29 1040 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 NFKBIL1Q9UBC1 381 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 H3BN98 237 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 AP5Z1O43299 807 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 RAD23AP54725 363 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 UNC5AQ6ZN44 842 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 DSELQ8IZU8 1212 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FLCNQ8NFG4 579 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 SPPL2BQ8TCT7 592 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
GPC6-201ENST00000377047 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 TK2O00142 265 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ACSL4O60488 711 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 PAGE1O75459 146 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 ATG7O95352 703 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 SLC35G4P0C7Q5 338 aa13.76□□□□□ -0.21
GPC6-201ENST00000377047 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms