RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 MMP2P08253 660 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 CORO1AP31146 461 aaKnown RBP17.05■□□□□ 0.32
HLA-A-202ENST00000376806 CD86P42081 329 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 MAGEA12P43365 314 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 LIG3P49916 1009 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 CSE1LP55060 971 aaKnown RBP17.05■□□□□ 0.32
HLA-A-202ENST00000376806 PDE1BQ01064 536 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 DSC2Q02487 901 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 ITKQ08881 620 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 PDE1CQ14123 709 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-202ENST00000376806 TMCO4Q5TGY1 634 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 C7orf61Q8IZ16 206 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 YME1L1Q96TA2 773 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 RETREG1Q9H6L5 497 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 ATP13A1Q9HD20 1204 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
HLA-A-202ENST00000376806 INSL5Q9Y5Q6 135 aa17.05■□□□□ 0.32
HLA-A-202ENST00000376806 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 NEFHP12036 1026 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 ELF1P32519 619 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 PPM1AP35813 382 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 CHRNA4P43681 627 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 SERPINB8P50452 374 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 LBRQ14739 615 aaKnown RBP17.04■□□□□ 0.32
HLA-A-202ENST00000376806 C10orf67Q8IYJ2 551 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 TCEAL8Q8IYN2 117 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 PGBD5Q8N414 524 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 DCLK2Q8N568 766 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 AZIN2Q96A70 460 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 THOC1Q96FV9 657 aaKnown RBP17.04■□□□□ 0.32
HLA-A-202ENST00000376806 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 ATXN3LQ9H3M9 355 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 MRPL17Q9NRX2 175 aaKnown RBP17.04■□□□□ 0.32
HLA-A-202ENST00000376806 NSMCE4AQ9NXX6 385 aa17.04■□□□□ 0.32
HLA-A-202ENST00000376806 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
HLA-A-202ENST00000376806 H3BNC9 293 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 KLF11O14901 512 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 KLKB1P03952 638 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 F7P08709 466 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 IRF1P10914 325 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ETFBP38117 255 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 MAGEA9P43362 315 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 PPP3CCP48454 512 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 CDH4P55283 916 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 FYB2Q5VWT5 728 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 KYAT3Q6YP21 454 aaKnown RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 TRIM42Q8IWZ5 723 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 C10orf82Q8WW14 230 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 MCMBPQ9BTE3 642 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 MECRQ9BV79 373 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 KLF16Q9BXK1 252 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 RNF38Q9H0F5 515 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 MAGEH1Q9H213 219 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ARNT2Q9HBZ2 717 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 SNX15Q9NRS6 342 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 HAUS2Q9NVX0 235 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 UXTQ9UBK9 157 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 TIMM44O43615 452 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 IL1BP01584 269 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 SYN1P17600 705 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 HOXD9P28356 352 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 TYK2P29597 1187 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 EPHB3P54753 998 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 GNA12Q03113 381 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ACTN3Q08043 901 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 SEPT6Q14141 434 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 FSTL4Q6MZW2 842 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 DNAJB7Q7Z6W7 309 aaPredicted RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 SLC25A41Q8N5S1 370 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ARRDC2Q8TBH0 407 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 TADA1Q96BN2 335 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 ZNF599Q96NL3 588 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 SIRPGQ9P1W8 387 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 GGT7Q9UJ14 662 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 EMCNQ9ULC0 261 aa17.03■□□□□ 0.32
HLA-A-202ENST00000376806 LAMA2P24043 3122 aaKnown RBP17.03■□□□□ 0.32
HLA-A-202ENST00000376806 GOLGA8TH3BQL2 631 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 TEX28O15482 410 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 TROVE2P10155 538 aaKnown RBP eCLIP17.02■□□□□ 0.32
HLA-A-202ENST00000376806 SCTRP47872 440 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 CREMQ03060 361 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 ZNF235Q14590 738 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 IHHQ14623 411 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 N4BP2L1Q5TBK1 243 aaPredicted RBP17.02■□□□□ 0.32
HLA-A-202ENST00000376806 CMC1Q7Z7K0 106 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 TMEM150AQ86TG1 271 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 CNTN4Q8IWV2 1026 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 GPR65Q8IYL9 337 aa17.02■□□□□ 0.32
HLA-A-202ENST00000376806 OR7D4Q8NG98 312 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms