RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ESRP1Q6NXG1 681 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 CCDC117Q8IWD4 279 aaPredicted RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 PTCD2Q8WV60 388 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 MCUR1Q96AQ8 359 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 HMCESQ96FZ2 354 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 TSNARE1Q96NA8 513 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 OLA1Q9NTK5 396 aaKnown RBP20.51■□□□□ 0.87
VSX1-202ENST00000376709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.51■□□□□ 0.87
VSX1-202ENST00000376709 CLIC5Q9NZA1 410 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 IL37Q9NZH6 218 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 MARCH2Q9P0N8 246 aa20.51■□□□□ 0.87
VSX1-202ENST00000376709 MIA3Q5JRA6 1907 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 PQBP1O60828 265 aaKnown RBP20.5■□□□□ 0.87
VSX1-202ENST00000376709 CNTN5O94779 1100 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 HMBSP08397 361 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 PAMP19021 973 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 PSEN1P49768 467 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 HNRNPDQ14103 355 aaKnown RBP20.5■□□□□ 0.87
VSX1-202ENST00000376709 RCN2Q14257 317 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 TRIP4Q15650 581 aaPredicted RBP20.5■□□□□ 0.87
VSX1-202ENST00000376709 ALFQ53S48 1182 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 RINLQ6ZS11 566 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 ZNF683Q8IZ20 524 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 PABPC5Q96DU9 382 aaKnown RBP20.5■□□□□ 0.87
VSX1-202ENST00000376709 SORT1Q99523 831 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 SP110Q9HB58 689 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 NT5MQ9NPB1 228 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 TMEM248Q9NWD8 314 aa20.5■□□□□ 0.87
VSX1-202ENST00000376709 FAM92AA1XBS5 289 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 CAPN14A8MX76 684 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 AHSGP02765 367 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 SERPINA6P08185 405 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 FGFR3P22607 806 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 RAP1GAP2Q684P5 730 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 RANBP10Q6VN20 620 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 DENND6AQ8IWF6 608 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 SLC25A51Q9H1U9 297 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 STN1Q9H668 368 aaKnown RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 EBF2Q9HAK2 575 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 APOBEC2Q9Y235 224 aaKnown RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 MTMR11A4FU01 709 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 J3KR12 359 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 GSC2O15499 205 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 HAPLN1P10915 354 aaPredicted RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 CHRNA4P43681 627 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 WNT3AP56704 352 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 CTBP1Q13363 440 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 THOC5Q13769 683 aaKnown RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 CNGA3Q16281 694 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 MARC1Q5VT66 337 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 TREML1Q86YW5 311 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 CNTN4Q8IWV2 1026 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 TET1Q8NFU7 2136 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 SPPL2BQ8TCT7 592 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 SEPT8Q92599 483 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 FAM96AQ9H5X1 160 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 TASP1Q9H6P5 420 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 PNPOQ9NVS9 261 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 MARCH5Q9NX47 278 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 TAS2R1Q9NYW7 299 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 NOP53Q9NZM5 478 aaKnown RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 CPSF2Q9P2I0 782 aaKnown RBP20.49■□□□□ 0.87
VSX1-202ENST00000376709 SLC2A6Q9UGQ3 507 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 ANKRD6Q9Y2G4 727 aa20.49■□□□□ 0.87
VSX1-202ENST00000376709 SLC12A8A0AV02 714 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 G3V2L1 256 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 PHGDHO43175 533 aaKnown RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 ANP32DO95626 131 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 PEX11BO96011 259 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 GM2AP17900 193 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 PBX3P40426 434 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 CPA2P48052 419 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 SLC11A1P49279 550 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 HARS2P49590 506 aaKnown RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 MAXP61244 160 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 GPR17Q13304 367 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 TBCCQ15814 346 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 FBXL22Q6P050 247 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 FUT10Q6P4F1 479 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 RNF19BQ6ZMZ0 732 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 SLC25A41Q8N5S1 370 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 TEX9Q8N6V9 391 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 SCLYQ96I15 445 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 DEFB118Q96PH6 123 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 MRM3Q9HC36 420 aaKnown RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 NT5C1B-RDH14C9J2C7 533 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 ARRB2P32121 409 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 AVPR1AP37288 418 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 ARCN1P48444 511 aaKnown RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 MPP1Q00013 466 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 SLC10A7Q0GE19 358 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 WASHC2DQ5SRD0 308 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 RASIP1Q5U651 963 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 NSMCE1Q8WV22 266 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 IGSF8Q969P0 613 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 RPRD1AQ96P16 312 aaPredicted RBP20.48■□□□□ 0.87
VSX1-202ENST00000376709 KLHL5Q96PQ7 755 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
VSX1-202ENST00000376709 UBE2OQ9C0C9 1292 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms