RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 STOML2Q9UJZ1 356 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 FGF10O15520 208 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 BROXQ5VW32 411 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 LENG9Q96B70 501 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 MRPL9Q9BYD2 267 aaKnown RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 MICAL2O94851 1124 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ALDH2P05091 517 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 MGAT1P26572 445 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 GP5P40197 560 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 TAS2R41P59536 307 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 LGI2Q8N0V4 545 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 DEPDC4Q8N2C3 294 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 TBCBQ99426 244 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 CAB39LQ9H9S4 337 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF879B4DU55 563 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 USP17L7P0C7H9 530 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ELK3P41970 407 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 POLD2P49005 469 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ABATP80404 500 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 MBTD1Q05BQ5 628 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 RGS1Q08116 209 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 KCTD21Q4G0X4 260 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 LRRC17Q8N6Y2 441 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 NECTIN3Q9NQS3 549 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 TSPAN16Q9UKR8 245 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 MRASO14807 208 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 TOP3AQ13472 1001 aaPredicted RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF354BQ96LW1 612 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
VPS13A-204ENST00000376634 PNPLA6Q8IY17 1366 aa12.61□□□□□ -0.39
VPS13A-204ENST00000376634 PSMD11O00231 422 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 AMHP03971 560 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 RPA3P35244 121 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ARFIP1P53367 373 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 PGBD2Q6P3X8 592 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ZNHIT2Q9UHR6 403 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CXCL8P10145 99 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 MYL6P60660 151 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CYP4F2P78329 520 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CYP4F3Q08477 520 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 OFCC1Q8IZS5 231 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 POU5F2Q8N7G0 328 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 AGBL3Q8NEM8 1001 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CAVIN3Q969G5 261 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ERLEC1Q96DZ1 483 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 COX4I2Q96KJ9 171 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 RASSF1Q9NS23 344 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ATG14Q6ZNE5 492 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 OR2L5Q8NG80 312 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 C1QTNF1Q9BXJ1 281 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 EPB41L1Q9H4G0 881 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ZDHHC15Q96MV8 337 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 SYT15Q9BQS2 421 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 LMAN2LQ9H0V9 348 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 TRAV19A0A0A6YYK7 116 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 H3BNH8 94 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 PROSCO94903 275 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 MYBL2P10244 700 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ATP5F1P24539 256 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 PXMP2Q9NR77 195 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 A0A096LPK6 155 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CCDC166P0CW27 439 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 FAUP35544 74 aaKnown RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 EMC1Q8N766 993 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 RHBGQ9H310 441 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ARID1AO14497 2285 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 SREBF1P36956 1147 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 UGT2B15P54855 530 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 LYPLAL1Q5VWZ2 237 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ST3GAL5Q9UNP4 418 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 FCHO1O14526 889 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 HAT1O14929 419 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 SEC24AO95486 1093 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 CCNYL3P0C7X3 344 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 BACE1P56817 501 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 SQLEQ14534 574 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 TAF5Q15542 800 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 LEMD2Q8NC56 503 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 TCP10LQ8TDR4 215 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 ZNF607Q96SK3 696 aa12.6□□□□□ -0.39
VPS13A-204ENST00000376634 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
VPS13A-204ENST00000376634 SLC9A3R1O14745 358 aaPredicted RBP12.59□□□□□ -0.39
VPS13A-204ENST00000376634 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 LZTR1Q8N653 840 aa12.59□□□□□ -0.39
VPS13A-204ENST00000376634 CD101Q93033 1021 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms