RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TTC39CQ8N584 583 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 CPSF7Q8N684 471 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 CEP70Q8NHQ1 597 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 OMDQ99983 421 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 C16orf70Q9BSU1 422 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 EFCAB1Q9HAE3 211 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 IGSF9Q9P2J2 1179 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 CDYLQ9Y232 598 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 COPG1Q9Y678 874 aaKnown RBP14.33□□□□□ -0.12
CLCNKA-202ENST00000375692 ZBTB24O43167 697 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 PFDN1O60925 122 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 PTPN3P26045 913 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 SNX16P57768 344 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 BST2Q10589 180 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 OTUD1Q5VV17 481 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 LIPMQ5VYY2 423 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 ZYG11AQ6WRX3 759 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 CCNYL1Q8N7R7 359 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 ANKRD52Q8NB46 1076 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 CATSPER1Q8NEC5 780 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 NLRP7Q8WX94 980 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 EME1Q96AY2 570 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 COQ10BQ9H8M1 238 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 ZBTB26Q9HCK0 441 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 PLK2Q9NYY3 685 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 VPS28Q9UK41 221 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 CEPT1Q9Y6K0 416 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 TSPAN1O60635 241 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 VAPBO95292 243 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 ZNF26P17031 533 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 NMBRP28336 390 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 MATKP42679 507 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 NSUN2Q08J23 767 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 TRIM32Q13049 653 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 KIZQ2M2Z5 673 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 FAM219BQ5XKK7 198 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 GK5Q6ZS86 529 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 STRADAQ7RTN6 431 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 APBA2Q99767 749 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 C1QTNF1Q9BXJ1 281 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC2A11Q9BYW1 496 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 DNAAF2Q9NVR5 837 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 SNTG2Q9NY99 539 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 TLK1Q9UKI8 766 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 FIS1Q9Y3D6 152 aa14.32□□□□□ -0.12
CLCNKA-202ENST00000375692 AP2A1O95782 977 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 FLT3LGP49771 235 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 NDUFV1P49821 464 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 GALK1P51570 392 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 NR1H2P55055 460 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 USP10Q14694 798 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SYPL2Q5VXT5 272 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 IQSEC1Q6DN90 963 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SNX31Q8N9S9 440 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC7A14Q8TBB6 771 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 LRTOMTQ8WZ04 291 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 MLPHQ9BV36 600 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 GINS2Q9Y248 185 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 A0A0J9YVX5 310 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 H3BRB1 525 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 M0QYT0 321 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 EEF2KO00418 725 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 XPO1O14980 1071 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 TIMM44O43615 452 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 TRMUO75648 421 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 PSMC3P17980 439 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 CDH2P19022 906 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 HDCP19113 662 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 CD68P34810 354 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 RABGGTBP53611 331 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 PRKAA1Q13131 559 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 TMEM126BQ8IUX1 230 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SLC41A1Q8IVJ1 513 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 FSTL5Q8N475 847 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 GAB3Q8WWW8 586 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 SGF29Q96ES7 293 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 TUT1Q9H6E5 874 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 ERAP1Q9NZ08 941 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 EPS15L1Q9UBC2 864 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 CITO14578 2027 aa14.31□□□□□ -0.12
CLCNKA-202ENST00000375692 ARHGAP10A1A4S6 786 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 DLX3O60479 287 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 H2AFYO75367 372 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 MMP3P08254 477 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 APLP1P51693 650 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 BCAT1P54687 386 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 BEX3Q00994 111 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 PRKCZQ05513 592 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
CLCNKA-202ENST00000375692 PTK2BQ14289 1009 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms