RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 TCF20Q9UGU0 1960 aaKnown RBP15.83■□□□□ 0.12
CCDC40-202ENST00000374876 KCNK1O00180 336 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 XYLBO75191 536 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 LTFP02788 710 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 CRYMQ14894 314 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 RAB41Q5JT25 222 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 RTL10Q7L3V2 364 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 HS6ST3Q8IZP7 471 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 ZMIZ2Q8NF64 920 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 AGAP11Q8TF27 550 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 UTP4Q969X6 686 aaKnown RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SLC7A6OSQ96CW6 309 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SMARCD1Q96GM5 515 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 FUBP3Q96I24 572 aaKnown RBP eCLIP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 ZNF512Q96ME7 567 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 RIPOR3Q96MK2 946 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 CORO1BQ9BR76 489 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 KCNK13Q9HB14 408 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 RRN3Q9NYV6 651 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 RAD54BQ9Y620 910 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 NCAM2O15394 837 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 HAUS5O94927 633 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SLC34A2O95436 690 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 BMP1P13497 986 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 CCND1P24385 295 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 EPHB3P54753 998 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 NIPAL4Q0D2K0 466 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 CHI3L2Q15782 390 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SMAD2Q15796 467 aaKnown RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 DNAJB7Q7Z6W7 309 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-202ENST00000374876 TP53INP2Q8IXH6 220 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 C7orf26Q96N11 449 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 TUBB6Q9BUF5 446 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 ANLNQ9NQW6 1124 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SYBUQ9NX95 663 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 SIRPGQ9P1W8 387 aa15.82■□□□□ 0.12
CCDC40-202ENST00000374876 TRAFD1O14545 582 aaPredicted RBP15.81■□□□□ 0.12
CCDC40-202ENST00000374876 PAPLNO95428 1278 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 F9P00740 461 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 POLBP06746 335 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 MYL2P10916 166 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 PTPN2P17706 415 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 SERPINB3P29508 390 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 HCAR3P49019 387 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 BST1Q10588 318 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 SEMA3BQ13214 749 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 NAB1Q13506 487 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 PACS1Q6VY07 963 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 ELMOD1Q8N336 334 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 RAB3IL1Q8TBN0 382 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 EDEM1Q92611 657 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 PGAP3Q96FM1 320 aaPredicted RBP15.81■□□□□ 0.12
CCDC40-202ENST00000374876 TBC1D10AQ9BXI6 508 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 TXNDC16Q9P2K2 825 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 SLC17A6Q9P2U8 582 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 LNPEPQ9UIQ6 1025 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 NUMBLQ9Y6R0 609 aa15.81■□□□□ 0.12
CCDC40-202ENST00000374876 FAM237BA0A1B0GVD1 139 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 BIRC5O15392 142 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 DNAJC6O75061 913 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 RHOP08100 348 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PTPN3P26045 913 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PTPN4P29074 926 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 MTHFRP42898 656 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PUS10Q3MIT2 529 aaKnown RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 LONP2Q86WA8 852 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 ACMSDQ8TDX5 336 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 ATP2A3Q93084 1043 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 SKA1Q96BD8 255 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 WDCPQ9H6R7 721 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 MAGED2Q9UNF1 606 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 L3MBTL1Q9Y468 752 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 HHLA1C9JL84 531 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 I6L893 689 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 NRG2O14511 850 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 BPGMP07738 259 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 MAGEA11P43364 429 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 RPL10AP62906 217 aaKnown RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PPIDQ08752 370 aaKnown RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PLD1Q13393 1074 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PABPC1LQ4VXU2 614 aaKnown RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 KYAT3Q6YP21 454 aaKnown RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 RASSF3Q86WH2 238 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 ITFG1Q8TB96 612 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PSMG2Q969U7 264 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 AGAP3Q96P47 875 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 EPAS1Q99814 870 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 BRD8Q9H0E9 1235 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 FBXO6Q9NRD1 293 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-202ENST00000374876 ZFATQ9P243 1243 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 RPS6KL1Q9Y6S9 549 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 PTPRDP23468 1912 aa15.8■□□□□ 0.12
CCDC40-202ENST00000374876 NOTCH4Q99466 2003 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 A0A0C4DFX4 3053 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 MTSS1O43312 755 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 WFS1O76024 890 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 MYL4P12829 197 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 GJA1P17302 382 aa15.79■□□□□ 0.12
CCDC40-202ENST00000374876 MX2P20592 715 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms