RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CABYRO75952 493 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 CHRNGP07510 517 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 WNT3AP56704 352 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 DSC2Q02487 901 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 DUSP4Q13115 394 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 PEX6Q13608 980 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 KPNB1Q14974 876 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 LHX8Q68G74 356 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 PDPK2PQ6A1A2 396 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF470Q6ECI4 717 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 FBXL22Q6P050 247 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 GPATCH11Q8N954 259 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 RBM15BQ8NDT2 890 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 WDR60Q8WVS4 1066 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC39A13Q96H72 371 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 INPPL1O15357 1258 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 YWHAQP27348 245 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC1A2P43004 574 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC11A1P49279 550 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 FAM189BP81408 668 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 TUBB3Q13509 450 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 GPNMBQ14956 572 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 KRT72Q14CN4 511 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 INSCQ1MX18 579 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 CLEC14AQ86T13 490 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 CFAP52Q8N1V2 620 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 LZTR1Q8N653 840 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 SGF29Q96ES7 293 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 NDNQ99608 321 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 CCDC106Q9BWC9 280 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 TLE6Q9H808 572 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 NOP53Q9NZM5 478 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 TLK1Q9UKI8 766 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 ACTL7AQ9Y615 435 aa16.2■□□□□ 0.18
CNKSR1-202ENST00000374253 ENPP3O14638 875 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 HSPA4LO95757 839 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 PEX11BO96011 259 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 RPL17P18621 184 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 ADRA1AP35348 466 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 GEMP55040 296 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 MXRA7P84157 204 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 EML3Q32P44 896 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 CCDC153Q494R4 210 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 LDB1Q86U70 411 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 ISL2Q96A47 359 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 RPRD1AQ96P16 312 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 OMDQ99983 421 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 MCMBPQ9BTE3 642 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 MARCH5Q9NX47 278 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 MARCH2Q9P0N8 246 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 RUVBL2Q9Y230 463 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 TCAF1Q9Y4C2 921 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 PCDHB7Q9Y5E2 793 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 BUD23O43709 281 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 VNN2O95498 520 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC35E2BP0CK96 405 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 NCF2P19878 526 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 ARCN1P48444 511 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 IDH3AP50213 366 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 ANO4Q32M45 955 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 AFMIDQ63HM1 303 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 GPR22Q99680 433 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 RNPEPL1Q9HAU8 725 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 SP110Q9HB58 689 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 G3BP2Q9UN86 482 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 SQORQ9Y6N5 450 aa16.19■□□□□ 0.18
CNKSR1-202ENST00000374253 GOLGA8QA0A0J9YX86 632 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 GOLGA8OA6NCC3 632 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 GOLGA8NF8WBI6 632 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MPOP05164 745 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 PGM1P36871 562 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ACVRL1P37023 503 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 KCNQ1P51787 676 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 CSE1LP55060 971 aaKnown RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 NOGQ13253 232 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF683Q8IZ20 524 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 KIRREL3Q8IZU9 778 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MAPK15Q8TD08 544 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 SCLYQ96I15 445 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 FAM161BQ96MY7 647 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 GATA5Q9BWX5 397 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ACE2Q9BYF1 805 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 RHOJQ9H4E5 214 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 EBF2Q9HAK2 575 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 C15orf41Q9Y2V0 281 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MTMR11A4FU01 709 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MOXD2PA6NHM9 499 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 E9PBE3 544 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms