RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 MIIPQ5JXC2 388 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 TRAPPC5Q8IUR0 188 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 BPIFA1Q9NP55 256 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 BTBD7Q9P203 1132 aa14.49□□□□□ -0.09
TRAF1-201ENST00000373887 A0A0A6YYK5 440 aaPredicted RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 USP2O75604 605 aaPredicted RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 HMGCRP04035 888 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 MAPTP10636 758 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 RENBPP51606 427 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 LSM3P62310 102 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 OLFML2AQ68BL7 652 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 MAP4K3Q8IVH8 894 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 NETO2Q8NC67 525 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 KAT5Q92993 513 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 NUAK2Q9H093 628 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 GANQ9H2C0 597 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 TRIT1Q9H3H1 467 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 BTN3A1O00481 513 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 RCVRNP35243 200 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 HPCAL1P37235 193 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 CRATP43155 626 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 PYDC2Q56P42 97 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 CLEC17AQ6ZS10 378 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 SNX32Q86XE0 403 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 SYT12Q8IV01 421 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ACTL9Q8TC94 416 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 COL26A1Q96A83 441 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 DNAJC1Q96KC8 554 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ECDO95905 644 aaPredicted RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 CBFBQ13951 182 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 GRTP1Q5TC63 336 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 BHLHE22Q8NFJ8 381 aaPredicted RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 FBXO25Q8TCJ0 367 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 CDRT15Q96T59 188 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ARHGAP20Q9P2F6 1191 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 FCHO1O14526 889 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 MTA2O94776 668 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 USP41Q3LFD5 358 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 MAB21L3Q8N8X9 362 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 METTL6Q8TCB7 284 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 TCP10LQ8TDR4 215 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 EPB41L1Q9H4G0 881 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 SLC28A3Q9HAS3 691 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 GOLGA2P5Q9HBQ8 144 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 AASDHPPTQ9NRN7 309 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 BLOC1S4Q9NUP1 217 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ATAD3AQ9NVI7 634 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF112Q9UJU3 913 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 GPSM3Q9Y4H4 160 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 PNMA8CA0A1B0GUJ8 204 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ATP5BP06576 529 aaKnown RBP14.48□□□□□ -0.09
TRAF1-201ENST00000373887 COX7A2P14406 83 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 THOP1P52888 689 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ACAP1Q15027 740 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 PSMD5Q16401 504 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ZNF276Q8N554 614 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 SCAIQ8N9R8 606 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 EXO5Q9H790 373 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 ANAPC2Q9UJX6 822 aa14.48□□□□□ -0.09
TRAF1-201ENST00000373887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 PSMD10O75832 226 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 SCGNO76038 276 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 ADRB2P07550 413 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 HNMTP50135 292 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 XRCC4Q13426 336 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 NPNTQ6UXI9 565 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 RPTNQ6XPR3 784 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 CHPFQ8IZ52 775 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 ABCC13Q9NSE7 274 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 SAE1Q9UBE0 346 aaPredicted RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 RIPK3Q9Y572 518 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 IFNGR2P38484 337 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 IL2P60568 153 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 TARBP2Q15633 366 aaKnown RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 ARHGAP22Q7Z5H3 698 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 EEF1AKMT1Q8WVE0 214 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 PYDC1Q8WXC3 89 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 GAS2L1Q99501 681 aaPredicted RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 TBL1YQ9BQ87 522 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 NXF3Q9H4D5 531 aaKnown RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 CRYL1Q9Y2S2 319 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 PSIP1O75475 530 aaKnown RBP14.47□□□□□ -0.09
TRAF1-201ENST00000373887 PTPN3P26045 913 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 ELK3P41970 407 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 SERPINA13PQ6UXR4 307 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 DHRSXQ8N5I4 330 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 OR56A4Q8NGH8 313 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 NFKB1P19838 968 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 PAX7P23759 505 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 HECTD3Q5T447 861 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 MZT2AQ6P582 158 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 ATG14Q6ZNE5 492 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 BPIFB6Q8NFQ5 453 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 CXorf40AQ8TE69 158 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 DNMT3LQ9UJW3 386 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 RIC1Q4ADV7 1423 aa14.47□□□□□ -0.09
TRAF1-201ENST00000373887 IL1BP01584 269 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms