RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 POU5F2Q8N7G0 328 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 ELMO2Q96JJ3 720 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 RTP3Q9BQQ7 232 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 SLC39A8Q9C0K1 460 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 THAP1Q9NVV9 213 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 CIDEBQ9UHD4 219 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 MAGEA6P43360 314 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 ACLYP53396 1101 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 AIF1P55008 147 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 ARHGAP24Q8N264 748 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 HIPK4Q8NE63 616 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 ARNTL2Q8WYA1 636 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 PLAC1Q9HBJ0 212 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 PNPOQ9NVS9 261 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 GMIPQ9P107 970 aa17.32■□□□□ 0.36
VEGFA-205ENST00000372067 IPO11Q9UI26 975 aaKnown RBP17.32■□□□□ 0.36
VEGFA-205ENST00000372067 AAR2Q9Y312 384 aaKnown RBP17.32■□□□□ 0.36
VEGFA-205ENST00000372067 ANXA9O76027 345 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 BAG2O95816 211 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 ALDOAP04075 364 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 PSMD5Q16401 504 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 KYAT3Q6YP21 454 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 KBTBD2Q8IY47 623 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 CD99L2Q8TCZ2 262 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 TEKT5Q96M29 485 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 TBL1YQ9BQ87 522 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 THTPAQ9BU02 230 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 TDRKHQ9Y2W6 561 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 CENPFP49454 3210 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 IRAK2O43187 625 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 ITM2AO43736 263 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 DNAJC6O75061 913 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 CLCN2P51788 898 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 UBAP2LQ14157 1087 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 EML3Q32P44 896 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 SDR16C5Q8N3Y7 309 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 EXT2Q93063 718 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 EBF4Q9BQW3 602 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 MLPHQ9BV36 600 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 EIF2B3Q9NR50 452 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 TTC24A2A3L6 582 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 MEI4A8MW99 385 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 DDHD2O94830 711 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 CHRNA4P43681 627 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 NPY2RP49146 381 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 RPL34P49207 117 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 EPHB1P54762 984 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 RAP1GAP2Q684P5 730 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 FSTL4Q6MZW2 842 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 NANOGNBQ7Z5D8 188 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 LINC00523Q86TU6 105 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 SCG3Q8WXD2 468 aaKnown RBP17.31■□□□□ 0.36
VEGFA-205ENST00000372067 NT5C3BQ969T7 300 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 PCDHB7Q9Y5E2 793 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
VEGFA-205ENST00000372067 GOLGA8QA0A0J9YX86 632 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 GOLGA8OA6NCC3 632 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 C9IYK1 514 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 GOLGA8NF8WBI6 632 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 CD97P48960 835 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 IRF9Q00978 393 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 CIR1Q86X95 450 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 APBB2Q92870 758 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 VPS39Q96JC1 886 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 TUBGCP5Q96RT8 1024 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 VAT1Q99536 393 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 IL22Q9GZX6 179 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 LRMDAQ9H2I8 198 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 DENND2DQ9H6A0 471 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 RUVBL2Q9Y230 463 aaKnown RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 TBC1D30Q9Y2I9 924 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 SPO11Q9Y5K1 396 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 PLIN3O60664 434 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 CD68P34810 354 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 PGFP49763 221 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 IRF5Q13568 498 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 CNGA3Q16281 694 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 NFE2Q16621 373 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 SLC24A5Q71RS6 500 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 ZNF398Q8TD17 642 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 IRGQQ8WZA9 623 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 HDAC11Q96DB2 347 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 COMMD3-BMI1R4GMX3 469 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 BUD23O43709 281 aaKnown RBP17.3■□□□□ 0.36
VEGFA-205ENST00000372067 SERPINE1P05121 402 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 HOXD10P28358 340 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 GATMP50440 423 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 GEMP55040 296 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 GALNT2Q10471 571 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 VWA5B1Q5TIE3 1220 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 FAM117BQ6P1L5 589 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 SLC41A1Q8IVJ1 513 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 MOCOSQ96EN8 888 aa17.3■□□□□ 0.36
VEGFA-205ENST00000372067 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms