RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ITGA1P56199 1179 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 LSM3P62310 102 aaKnown RBP17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 CTXN3Q4LDR2 81 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 GLT6D1Q7Z4J2 308 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 ZNF554Q86TJ5 538 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 C12orf50Q8NA57 414 aaPredicted RBP17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 SPATC1LQ9H0A9 340 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 ABCB10Q9NRK6 738 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 SPATA2Q9UM82 520 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 EFR3BQ9Y2G0 817 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 NR2E1Q9Y466 385 aa17.34■□□□□ 0.37
PTP4A1-201ENST00000370651 STAU1O95793 577 aaKnown RBP17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 PTGIRP43119 386 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 GALK1P51570 392 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 SLC7A2P52569 658 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 JAM2P57087 298 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 FAM187BQ17R55 369 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 ZNF57Q68EA5 555 aaPredicted RBP17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 OVOS1Q6IE37 1185 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 ADGRD1Q6QNK2 874 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 ZNF621Q6ZSS3 439 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 VSIG10LQ86VR7 867 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 KRT78Q8N1N4 520 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 AADATQ8N5Z0 425 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 POC5Q8NA72 575 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 LRRN4Q8WUT4 740 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 C19orf60Q96EN9 201 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 LGMNQ99538 433 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 TIMMDC1Q9NPL8 285 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 ARHGEF3Q9NR81 526 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 GALNT8Q9NY28 637 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 CDH22Q9UJ99 828 aa17.33■□□□□ 0.37
PTP4A1-201ENST00000370651 H3BN98 237 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 SLC15A2Q16348 729 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 HSFY1Q96LI6 401 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 EHD3Q9NZN3 535 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 BCL9O00512 1426 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 TRIM43BA6NCK2 446 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 CETPP11597 493 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 HGFP14210 728 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 TCF3P15923 654 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 MMP8P22894 467 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 IL2P60568 153 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 DPYSQ14117 519 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 GRIK4Q16099 956 aa17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 NBPF12Q5TAG4 269 aaPredicted RBP17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 TNPO3Q9Y5L0 923 aaKnown RBP17.33■□□□□ 0.36
PTP4A1-201ENST00000370651 ATP6AP2A0A1C7CYW4 349 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 MYL12BO14950 172 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 ATP6AP2O75787 350 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 USP17L7P0C7H9 530 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 HNRNPLP14866 589 aaKnown RBP eCLIP17.32■□□□□ 0.364e-15■■□□□ 12.2
PTP4A1-201ENST00000370651 KPNA1P52294 538 aaPredicted RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 FASTKD3Q14CZ7 662 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 S100ZQ8WXG8 99 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 CENPIQ92674 756 aaPredicted RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 NKD2Q969F2 451 aaPredicted RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 VPS45Q9NRW7 570 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 OPTCQ9UBM4 332 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 NFICP08651 508 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 LPIN1Q14693 890 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF284Q2VY69 593 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 KLHL17Q6TDP4 642 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 ARHGAP36Q6ZRI8 547 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 APTXQ7Z2E3 356 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 ZFP42Q96MM3 310 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 C12orf65Q9H3J6 166 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 CATSPERZQ9NTU4 200 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 GRHL1Q9NZI5 618 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 SLC12A4Q9UP95 1085 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 RGL2O15211 777 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 EIF2S1P05198 315 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 DPEP1P16444 411 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 GOT1P17174 413 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 PPP2R1BP30154 601 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 IDH2P48735 452 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 COX10Q12887 443 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 TRIM71Q2Q1W2 868 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 WDR36Q8NI36 951 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 JOSD2Q8TAC2 188 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 NAT14Q8WUY8 206 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 NPAS2Q99743 824 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 TSEN34Q9BSV6 310 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 WDR55Q9H6Y2 383 aaPredicted RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 FAM45AQ8TCE6 357 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 CPT1BQ92523 772 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 EPB41L1Q9H4G0 881 aa17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 SSU72Q9NP77 194 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 GNEQ9Y223 722 aaKnown RBP17.32■□□□□ 0.36
PTP4A1-201ENST00000370651 MBL2P11226 248 aaPredicted RBP17.31■□□□□ 0.36
PTP4A1-201ENST00000370651 MYL12AP19105 171 aa17.31■□□□□ 0.36
PTP4A1-201ENST00000370651 SFSWAPQ12872 951 aaKnown RBP17.31■□□□□ 0.36
PTP4A1-201ENST00000370651 GRIK3Q13003 919 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms