RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 POM121L1PQ3SYA9 428 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CARD16Q5EG05 197 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 ATXN7L2Q5T6C5 722 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 TMCO4Q5TGY1 634 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 KAZNQ674X7 775 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 DPY19L3Q6ZPD9 716 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 NT5DC3Q86UY8 548 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 KBTBD6Q86V97 674 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 RCOR2Q8IZ40 523 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CHST14Q8NCH0 376 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 OR6K2Q8NGY2 324 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 PIP4K2CQ8TBX8 421 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 EXOC2Q96KP1 924 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 FAM129BQ96TA1 746 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 PHOX2BQ99453 314 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 OMDQ99983 421 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 KCNF1Q9H3M0 494 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 DYRK4Q9NR20 520 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 NCKAP1Q9Y2A7 1128 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 PCDHA3Q9Y5H8 950 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 HEY1Q9Y5J3 304 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 USP34Q70CQ2 3546 aa15.08■□□□□ 0.01
COL9A1-204ENST00000370496 THADAQ6YHU6 1953 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 CEP192Q8TEP8 1941 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 A0A1W2PP55 124 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 MIF4GDA9UHW6 222 aaKnown RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 ZNF821O75541 412 aaPredicted RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 RHOBTB1O94844 696 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 MX2P20592 715 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 CETN2P41208 172 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 GARSP41250 739 aaKnown RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 RWDD2BP57060 319 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 RFTN1Q14699 578 aaPredicted RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 LBRQ14739 615 aaKnown RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 LLGL1Q15334 1064 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 PMS2CLQ68D20 193 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 SLC9A4Q6AI14 798 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 LPCAT2Q7L5N7 544 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 LRRC49Q8IUZ0 686 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 BBS5Q8N3I7 341 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 PLD5Q8N7P1 536 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 FAM122AQ96E09 287 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 TOE1Q96GM8 510 aaKnown RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 PPP1R16AQ96I34 528 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 ZNF599Q96NL3 588 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 HEPHQ9BQS7 1158 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 ITM2CQ9NQX7 267 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 FBXL12Q9NXK8 326 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 DTLQ9NZJ0 730 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 LHX3Q9UBR4 397 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 MBD1Q9UIS9 605 aaPredicted RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 GMEB2Q9UKD1 530 aa15.08■□□□□ 0
COL9A1-204ENST00000370496 PACSIN2Q9UNF0 486 aaPredicted RBP15.08■□□□□ 0
COL9A1-204ENST00000370496 DMDP11532 3685 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 hCG_1818297A0A087WSY0 165 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 PROB1E7EW31 1015 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 KRIT1O00522 736 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 MAFKO60675 156 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 NEBLO76041 1014 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 IGLV3-19P01714 112 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 CTSLP07711 333 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 KRT10P13645 584 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 RAD51Q06609 339 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 PPP2R5EQ16537 467 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 PLK5Q496M5 336 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 CCDC181Q5TID7 509 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 LAIR1Q6GTX8 287 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 TIGD7Q6NT04 549 aaPredicted RBP15.07■□□□□ 0
COL9A1-204ENST00000370496 ZNF662Q6ZS27 426 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 USP30Q70CQ3 517 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 ARMCX6Q7L4S7 300 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 HDDC3Q8N4P3 179 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 AADATQ8N5Z0 425 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 CCNYQ8ND76 341 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 HINFPQ9BQA5 517 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 BTBD1Q9H0C5 482 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 NCDNQ9UBB6 729 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 SERGEFQ9UGK8 458 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 SEPT3Q9UH03 358 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 SARDHQ9UL12 918 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 PPM1HQ9ULR3 514 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 FZD4Q9ULV1 537 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 WASF2Q9Y6W5 498 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 ANKRD36A6QL64 1941 aa15.07■□□□□ 0
COL9A1-204ENST00000370496 TNRC6BQ9UPQ9 1833 aaKnown RBP15.06■□□□□ 0
COL9A1-204ENST00000370496 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 PRR23AA6NEV1 266 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 PPP1R12AO14974 1030 aaPredicted RBP15.06■□□□□ 0
COL9A1-204ENST00000370496 ZSCAN12O43309 604 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 CST8O60676 142 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 LEFTY1O75610 366 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 C7P10643 843 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 TGM2P21980 687 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 DHPSP49366 369 aaPredicted RBP15.06■□□□□ 0
COL9A1-204ENST00000370496 METAP1P53582 386 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 COPS2P61201 443 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 CYTH1Q15438 398 aa15.06■□□□□ 0
COL9A1-204ENST00000370496 TAZQ16635 292 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms