RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CHD6Q8TD26 2715 aa10.57□□□□□ -0.72
CLRN3-201ENST00000368671 DRGXA6NNA5 263 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 LEFTY1O75610 366 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 PIAS2O75928 621 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 MT-CO3P00414 261 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 F9P00740 461 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 PRB1P04280 392 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 ALPPL2P10696 532 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 MYF5P13349 255 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 CYP11B1P15538 503 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 SLC19A1P41440 591 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 DNA2P51530 1060 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 NEK3P51956 506 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 BPIFB4P59827 614 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 E2F1Q01094 437 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 DRAP1Q14919 205 aaPredicted RBP10.56□□□□□ -0.72
CLRN3-201ENST00000368671 SLC25A52Q3SY17 297 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 ZNF542PQ5EBM4 170 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 DPY19L3Q6ZPD9 716 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 PTAR1Q7Z6K3 402 aaPredicted RBP10.56□□□□□ -0.72
CLRN3-201ENST00000368671 ERICH1Q86X53 443 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 FAM71AQ8IYT1 594 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 OR4C6Q8NH72 309 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 RFFLQ8WZ73 363 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 PGAP3Q96FM1 320 aaPredicted RBP10.56□□□□□ -0.72
CLRN3-201ENST00000368671 CFAP57Q96MR6 1250 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 FCRL3Q96P31 734 aaPredicted RBP10.56□□□□□ -0.72
CLRN3-201ENST00000368671 UBL7Q96S82 380 aaPredicted RBP10.56□□□□□ -0.72
CLRN3-201ENST00000368671 ATP13A1Q9HD20 1204 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 DNAJC28Q9NX36 388 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 PCDHB1Q9Y5F3 818 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 RAI2Q9Y5P3 530 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 FHOD1Q9Y613 1164 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 ACTL7AQ9Y615 435 aa10.56□□□□□ -0.72
CLRN3-201ENST00000368671 CACNA1GO43497 2377 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ZZEF1O43149 2961 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 IGLV3-10A0A075B6K4 115 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 A6NNZ2 444 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 PES1O00541 588 aaKnown RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 GIMD1P0DJR0 217 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ADRB3P13945 408 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 CDH5P33151 784 aaPredicted RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ACTN2P35609 894 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 FLT3P36888 993 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 GABRB2P47870 512 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 SERPINH1P50454 418 aaKnown RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 CCNHP51946 323 aaPredicted RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ARF5P84085 180 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 CCDC173Q0VFZ6 552 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 VWA3BQ502W6 1294 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 RETSATQ6NUM9 610 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 Q6ZSR6 202 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 FAM131BQ86XD5 332 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 FAM114A1Q8IWE2 563 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 DRC7Q8IY82 874 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 SLC22A18ASQ8N1D0 253 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 DCBLD1Q8N8Z6 715 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 FGF11Q92914 225 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 NT5C3BQ969T7 300 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 APOLD1Q96LR9 279 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 HEPHQ9BQS7 1158 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 HDAC8Q9BY41 377 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ZYG11BQ9C0D3 744 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 NDST4Q9H3R1 872 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 PRORYQ9H606 182 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 ZDHHC6Q9H6R6 413 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 METTL5Q9NRN9 209 aaKnown RBP10.55□□□□□ -0.72
CLRN3-201ENST00000368671 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 DOCK4Q8N1I0 1966 aa10.55□□□□□ -0.72
CLRN3-201ENST00000368671 TDRD6O60522 2096 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 SHROOM3Q8TF72 1996 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 RAD51BO15315 384 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ZNF821O75541 412 aaPredicted RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 NEBLO76041 1014 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 PAK4O96013 591 aaPredicted RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 MMEP08473 750 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 CKMT1AP12532 417 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ITGB7P26010 798 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 L1CAMP32004 1257 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 SCNN1AP37088 669 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 UBE2HP62256 183 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 RPS21P63220 83 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ATP11AP98196 1134 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 GNA12Q03113 381 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 FGL2Q14314 439 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 CDO1Q16878 200 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 TBC1D25Q3MII6 688 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 TMEM259Q4ZIN3 620 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 CARD16Q5EG05 197 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 MIIPQ5JXC2 388 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms