RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HHLA1C9JL84 531 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 ARNTLO00327 626 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 TTI1O43156 1089 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 ULK1O75385 1050 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 DRD2P14416 443 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 BDNFP23560 247 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 KDELR1P24390 212 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 IL1R2P27930 398 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 MAP2K3P46734 347 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 DAOAP59103 153 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 PDK2Q15119 407 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 CCNG2Q16589 344 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 TAZQ16635 292 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 SMTNL2Q2TAL5 461 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 SLC25A52Q3SY17 297 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 FUT10Q6P4F1 479 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 EMBQ6PCB8 327 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 MFSD7Q6UXD7 560 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 CDH24Q86UP0 819 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 KCTD6Q8NC69 237 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 SLC2A13Q96QE2 648 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.02□□□□□ -0.97
TPM3-213ENST00000368545 FRMD8P1Q9BZ68 369 aaPredicted RBP9.02□□□□□ -0.97
TPM3-213ENST00000368545 FAM129AQ9BZQ8 928 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 DCLK3Q9C098 648 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 FAM114A2Q9NRY5 505 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 KLHL11Q9NVR0 708 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 MARCH5Q9NX47 278 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 WNT16Q9UBV4 365 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 PCSK1NQ9UHG2 260 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
TPM3-213ENST00000368545 TCRBV7S2A1N4TA0A589 114 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 H7C4K7 107 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA12O60330 932 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 DGKIO75912 1065 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 GAS8O95995 478 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ZBED1O96006 694 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 GALTP07902 379 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 EPXP11678 715 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ALDH7A1P49419 539 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 GATMP50440 423 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 DLX2Q07687 328 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 TAF5Q15542 800 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 DUSP6Q16828 381 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 SLC39A12Q504Y0 691 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMEM177Q53S58 311 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CWF19L1Q69YN2 538 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 TXNRD3NBQ6F5E7 133 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 DRICH1Q6PGQ1 229 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 VSTM1Q6UX27 236 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 C11orf74Q86VG3 221 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CMIPQ8IY22 773 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TDRD5Q8NAT2 981 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 RAPGEF5Q92565 580 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMEM209Q96SK2 561 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 KCNK16Q96T55 309 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ULBP1Q9BZM6 244 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMLHEQ9NVH6 421 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ZNF446Q9NWS9 450 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA8Q9Y5G5 932 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA7Q9Y5G6 932 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA6Q9Y5G7 932 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDHGA3Q9Y5H0 932 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 CAPN9O14815 690 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ENDOD1O94919 500 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 THBDP07204 575 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 NAT1P18440 290 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 KPNA1P52294 538 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 LIMK1P53667 647 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CACNA2D1P54289 1103 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 AIF1P55008 147 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 DRG2P55039 364 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 HDAC4P56524 1084 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 BCAR1P56945 870 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 FAPQ12884 760 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CTXN3Q4LDR2 81 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 FAM171A1Q5VUB5 890 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 KAZNQ674X7 775 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.01□□□□□ -0.972e-19■■■□□ 19.2
TPM3-213ENST00000368545 BBS12Q6ZW61 710 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CYP4V2Q6ZWL3 525 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 BEND5Q7L4P6 421 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PSTKQ8IV42 348 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 SUMF1Q8NBK3 374 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PCDH19Q8TAB3 1148 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 AENQ8WTP8 325 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 C2orf15Q8WU43 125 aaKnown RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 HSPH1Q92598 858 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 CAVIN3Q969G5 261 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 NT5C3BQ969T7 300 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 HSPBAP1Q96EW2 488 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PEBP4Q96S96 227 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 ERP44Q9BS26 406 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 HEMGNQ9BXL5 484 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms