RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LLGL1Q15334 1064 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 INO80DQ53TQ3 878 aaPredicted RBP15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 LAIR1Q6GTX8 287 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 DCLK2Q8N568 766 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 LRRN4Q8WUT4 740 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 EXOC2Q96KP1 924 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 CCDC114Q96M63 670 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 GPR174Q9BXC1 333 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 FBXL12Q9NXK8 326 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 PALMO75781 387 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ADH1BP00325 375 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 RECQLP46063 649 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 IL10RBQ08334 325 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLC10A2Q12908 348 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ELF2Q15723 593 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ARSIQ5FYB1 569 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLC36A4Q6YBV0 504 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 DSG4Q86SJ6 1040 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 C11orf74Q86VG3 221 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLC41A1Q8IVJ1 513 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 HDDC3Q8N4P3 179 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 PLD5Q8N7P1 536 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 OR2AP1Q8NGE2 309 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 GANCQ8TET4 914 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 CASKIN2Q8WXE0 1202 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZDHHC6Q9H6R6 413 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 IL36AQ9UHA7 158 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ANKRD36A6QL64 1941 aa15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZFHX2Q9C0A1 2572 aaPredicted RBP15.33■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 MAFKO60675 156 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 LEFTY1O75610 366 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 RNASEH2AO75792 299 aaKnown RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 PEX11BO96011 259 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 GSRP00390 522 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 C5AR1P21730 350 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 CTNNA1P35221 906 aaKnown RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 CDKN2BP42772 138 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 RGRP47804 291 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 DHPSP49366 369 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 RHOAP61586 193 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLC9A4Q6AI14 798 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 SPOCD1Q6ZMY3 1216 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 RYBPQ8N488 228 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 ATPAF2Q8N5M1 289 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 ARRDC3Q96B67 414 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 CALR3Q96L12 384 aaKnown RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 HEPHQ9BQS7 1158 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 NEUROG2Q9H2A3 272 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 NCDNQ9UBB6 729 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 SCML1Q9UN30 329 aa15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
SMPDL3A-201ENST00000368440 GPR179Q6PRD1 2367 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 C1QTNF3-AMACRE9PGA6 284 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 KPNA3O00505 521 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 NDUFS2O75306 463 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 EPN2O95208 641 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 CCDC175P0C221 793 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 KRT10P13645 584 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 OXTRP30559 389 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ADCY2Q08462 1091 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLC10A7Q0GE19 358 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GALNT2Q10471 571 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 CNTN1Q12860 1018 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 CCDC6Q16204 474 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 TAZQ16635 292 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 NPNTQ6UXI9 565 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 USP30Q70CQ3 517 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 NT5DC3Q86UY8 548 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 VSIG1Q86XK7 387 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 RFX6Q8HWS3 928 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 TSEN2Q8NCE0 465 aaKnown RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 TMIEQ8NEW7 156 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 OMDQ99983 421 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ARRDC1-AS1Q9H2J1 176 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 C6orf106Q9H6K1 298 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 DTLQ9NZJ0 730 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 EVLQ9UI08 416 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GUCA1BQ9UMX6 200 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 PACSIN2Q9UNF0 486 aaPredicted RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 ATXN2Q99700 1313 aaKnown RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 RALGAPA1Q6GYQ0 2036 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 KRIT1O00522 736 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 MUSKO15146 869 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 INSIG1O15503 277 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GJB3O75712 270 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 FTCDO95954 541 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 PRNPP04156 253 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 CTNNA2P26232 953 aa15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 GARSP41250 739 aaKnown RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 SNRPD1P62314 119 aaKnown RBP15.31■□□□□ 0.04
SMPDL3A-201ENST00000368440 DYNLT1P63172 113 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms