RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 NRSN1Q8IZ57 195 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 EFCAB3Q8N7B9 438 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 ZNF641Q96N77 438 aaPredicted RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 RMI1Q9H9A7 625 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 TAS2R13Q9NYV9 303 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 STYXL1Q9Y6J8 313 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 DOCK2Q92608 1830 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 FAM221BA6H8Z2 402 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 CES2O00748 559 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 TSHRP16473 764 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 SLC9A1P19634 815 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 LPOP22079 712 aaPredicted RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 CCNCP24863 283 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 SERPINB1P30740 379 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 PBX3P40426 434 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 ETF1P62495 437 aaKnown RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 SLC44A4Q53GD3 710 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 NEK5Q6P3R8 708 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 ADHFE1Q8IWW8 467 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 PARP9Q8IXQ6 854 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 SCML4Q8N228 414 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 HTR3CQ8WXA8 447 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 TNFRSF25Q93038 417 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 TATDN2Q93075 761 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 PCED1BQ96HM7 432 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 CLSTN3Q9BQT9 956 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 PCMTD2Q9NV79 361 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 L1RE1Q9UN81 338 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 C2orf71A6NGG8 1288 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 SMIM22K7EJ46 135 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 DHX15O43143 795 aaKnown RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 CYP1A1P04798 512 aaPredicted RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 HPGDP15428 266 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 TYK2P29597 1187 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 RFC1P35251 1148 aaPredicted RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 SPAM1P38567 509 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 NCALDP61601 193 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 MED21Q13503 144 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 RFX8Q6ZV50 586 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 WDR75Q8IWA0 830 aaKnown RBP8.4□□□□□ -1.06
SSR2-202ENST00000368311 LSMEM2Q8N112 164 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 DCAF4L2Q8NA75 395 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 SERPINI1Q99574 410 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 DNAJC7Q99615 494 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 CNPPD1Q9BV87 410 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 MINDY3Q9H8M7 445 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 NMRAL1Q9HBL8 299 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 CASS4Q9NQ75 786 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 WNT16Q9UBV4 365 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.06
SSR2-202ENST00000368311 FOXN3O00409 490 aaPredicted RBP8.4□□□□□ -1.07
SSR2-202ENST00000368311 TEX28O15482 410 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 NOL4O94818 638 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 SERPINB8P50452 374 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.07
SSR2-202ENST00000368311 DUOXA1Q1HG43 343 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 SLC10A6Q3KNW5 377 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 LEXMQ3ZCV2 418 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 TEDDM1Q5T9Z0 273 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 CACHD1Q5VU97 1274 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 TTLQ8NG68 377 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 POP5Q969H6 163 aaKnown RBP8.4□□□□□ -1.07
SSR2-202ENST00000368311 ZDHHC12Q96GR4 267 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 TMEM74Q96NL1 305 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 EXO5Q9H790 373 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 WDR26Q9H7D7 661 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 COG4Q9H9E3 785 aa8.4□□□□□ -1.07
SSR2-202ENST00000368311 ZC3H7BQ9UGR2 993 aaKnown RBP8.4□□□□□ -1.07
SSR2-202ENST00000368311 RASA4BC9J798 803 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 NOL3O60936 208 aaKnown RBP8.39□□□□□ -1.07
SSR2-202ENST00000368311 VPS4BO75351 444 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 PMPCBO75439 489 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 KRT6AP02538 564 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 C4BPAP04003 597 aaKnown RBP8.39□□□□□ -1.07
SSR2-202ENST00000368311 KRT6BP04259 564 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
SSR2-202ENST00000368311 HRH2P25021 359 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 KRT6CP48668 564 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 CCT8P50990 548 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 ARHGDIAP52565 204 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 CCDC6Q16204 474 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 BHLHB9Q6PI77 547 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 RBM43Q6ZSC3 357 aaKnown RBP8.39□□□□□ -1.07
SSR2-202ENST00000368311 OTOAQ7RTW8 1153 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 FAM124AQ86V42 546 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
SSR2-202ENST00000368311 RAB43Q86YS6 212 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 CRLF3Q8IUI8 442 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 SIAH1Q8IUQ4 282 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 KAT2BQ92831 832 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 BBS4Q96RK4 519 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 IL22Q9GZX6 179 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 ZBP1Q9H171 429 aa8.39□□□□□ -1.07
SSR2-202ENST00000368311 DPH5Q9H2P9 285 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms