RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 BNC2Q6ZN30 1099 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 SNX32Q86XE0 403 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 LRRC49Q8IUZ0 686 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ATPAF2Q8N5M1 289 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 RNF34Q969K3 372 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TUBGCP5Q96RT8 1024 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 HAPLN3Q96S86 360 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 IL12RB2Q99665 862 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CENPKQ9BS16 269 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ENTPD7Q9NQZ7 604 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CHST12Q9NRB3 414 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TMEM30AQ9NV96 361 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ARHGEF38Q9NXL2 777 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 MYO18AQ92614 2054 aaKnown RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 TADA2AO75478 443 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 AHSGP02765 367 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 ZNF865P0CJ78 1059 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 STMN1P16949 149 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 NAGLUP54802 743 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 SATB1Q01826 763 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 NSUN2Q08J23 767 aaKnown RBP eCLIP14.49□□□□□ -0.09
CD48-201ENST00000368045 MSLNQ13421 630 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 SFT2D3Q587I9 215 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 TCHHL1Q5QJ38 904 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 OTOP3Q7RTS5 596 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 PIWIL4Q7Z3Z4 852 aaKnown RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 DSELQ8IZU8 1212 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 CENPLQ8N0S6 344 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 PGAM4Q8N0Y7 254 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 PQLC1Q8N2U9 271 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 FSTL5Q8N475 847 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 PHC3Q8NDX5 983 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 CATSPER1Q8NEC5 780 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 DQX1Q8TE96 717 aaKnown RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 KCTD4Q8WVF5 259 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 EDEM1Q92611 657 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 PRKD2Q9BZL6 878 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 MRPL46Q9H2W6 279 aaKnown RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 WDR55Q9H6Y2 383 aaPredicted RBP14.49□□□□□ -0.09
CD48-201ENST00000368045 NEU3Q9UQ49 428 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 GIT1Q9Y2X7 761 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 TCAF1Q9Y4C2 921 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 SNX10Q9Y5X0 201 aa14.49□□□□□ -0.09
CD48-201ENST00000368045 TRPC5OSA6NMA1 111 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 M0QZ92 97 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 MATN3O15232 486 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 MAP3K13O43283 966 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 RNASEH1O60930 286 aaKnown RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 ZMPSTE24O75844 475 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 ODC1P11926 461 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 VCLP18206 1134 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 PEX2P28328 305 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 GABRB3P28472 473 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 ARCN1P48444 511 aaKnown RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 MRPS6P82932 125 aaKnown RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 MAP2K5Q13163 448 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 PEX6Q13608 980 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 MORN1Q5T089 497 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 FOXB2Q5VYV0 432 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 LPCAT4Q643R3 524 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 KIAA0930Q6ICG6 404 aaPredicted RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 DENND5AQ6IQ26 1287 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 TIGD7Q6NT04 549 aaPredicted RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 FAM171BQ6P995 826 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 KIAA0408Q6ZU52 694 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 METTL23Q86XA0 190 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 SLC41A1Q8IVJ1 513 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 ARHGAP12Q8IWW6 846 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 ICA1LQ8NDH6 482 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 GABPB2Q8TAK5 448 aaPredicted RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 DLG3Q92796 817 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 MYLPFQ96A32 169 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 CELF6Q96J87 481 aaKnown RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 FAR2Q96K12 515 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 SH3GL3Q99963 347 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 MRPL57Q9BQC6 102 aaKnown RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 ACBD6Q9BR61 282 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 CATSPERBQ9H7T0 1116 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 DMAP1Q9NPF5 467 aaPredicted RBP14.48□□□□□ -0.09
CD48-201ENST00000368045 FAM105AQ9NUU6 356 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 UBP1Q9NZI7 540 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 FNIP2Q9P278 1114 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 TBC1D30Q9Y2I9 924 aa14.48□□□□□ -0.09
CD48-201ENST00000368045 FAM95CA0A1B0GW59 222 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 AIM2O14862 343 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 PHGDHO43175 533 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 AP1G1O43747 822 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 DLX3O60479 287 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 SORBS2O94875 1100 aaKnown RBP14.47□□□□□ -0.09
CD48-201ENST00000368045 CYP11A1P05108 521 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 ZCCHC18P0CG32 403 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 EPHA3P29320 983 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 ADRA1AP35348 466 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 CD151P48509 253 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 CLCNKBP51801 687 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 RABGGTBP53611 331 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 AQP4P55087 323 aa14.47□□□□□ -0.09
CD48-201ENST00000368045 POU4F1Q01851 419 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms