RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 NLNQ9BYT8 704 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PRDM5Q9NQX1 630 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 EIF2B3Q9NR50 452 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 GPATCH2LQ9NWQ4 482 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 EIF4E1BA6NMX2 242 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 CBX6O95503 412 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 TCHHL1Q5QJ38 904 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 IRF2BP1Q8IU81 584 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 C8orf59Q8N0T1 100 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 DEPDC4Q8N2C3 294 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 DOLKQ9UPQ8 538 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 INAQ16352 499 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PROX1Q92786 737 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 POMKQ9H5K3 350 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZNF510Q9Y2H8 683 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 UQCRBP14927 111 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 BTKQ06187 659 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PPIDQ08752 370 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 MARK2Q7KZI7 788 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 NFKB1P19838 968 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PGS1Q32NB8 556 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 FUT11Q495W5 492 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZNF549Q6P9A3 640 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 LCLAT1Q6UWP7 414 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PPP1R16AQ96I34 528 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC15A5A6NIM6 579 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ADCY6O43306 1168 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 EDF1O60869 148 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC2A4P14672 509 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 BROXQ5VW32 411 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ALG3Q92685 438 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 DNMT3LQ9UJW3 386 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PADI4Q9UM07 663 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PLLPQ9Y342 182 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ATG7O95352 703 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 CKBP12277 381 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCDC167Q9P0B6 97 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 V9GYQ6 96 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 CATP04040 527 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARMC4Q5T2S8 1044 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZCCHC7Q8N3Z6 543 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PHF21BQ96EK2 531 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 HOPXQ9BPY8 73 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 TGFB1I1O43294 461 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 OTCP00480 354 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 COX4I1P13073 169 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 R3HCC1LQ7Z5L2 792 aaKnown RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 SFRP1Q8N474 314 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 AMER2Q8N7J2 671 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 GIT1Q9Y2X7 761 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PEX1O43933 1283 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 PSMB4P28070 264 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 ATXN3P54252 364 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 BST1Q10588 318 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 LACTB2Q53H82 288 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 FAM183BPQ6ZVS7 135 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC44A1Q8WWI5 657 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 HGH1Q9BTY7 390 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 LZTS1Q9Y250 596 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 NCF1BA6NI72 391 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 NCF1CA8MVU1 366 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 NCF1P14598 390 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 HALP42357 657 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 BCL2L1Q07817 233 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 NRXN3Q9Y4C0 1643 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 TMEM191CA6NGB0 347 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 TINF2Q9BSI4 451 aa12.17□□□□□ -0.46
CDC42BPA-203ENST00000366766 BTN3A1O00481 513 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCNA2P20248 432 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRM5P41594 1212 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 DDX39BQ13838 428 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 IKBIPQ70UQ0 350 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 PAGE2Q7Z2X7 111 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRIN2DO15399 1336 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 PDHXO00330 501 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 USP17L7P0C7H9 530 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TSPAN14Q8NG11 270 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ACOX2Q99424 681 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 SNRNP25Q9BV90 132 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 PSME2Q9UL46 239 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 PRR23AA6NEV1 266 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CYP2A13Q16696 494 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ST13P5Q8NFI4 369 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZNF483Q8TF39 744 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 RNF145Q96MT1 663 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TCF3P15923 654 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms