RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 FGF11Q92914 225 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 IFT43Q96FT9 208 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF830Q96NB3 372 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 FCRL3Q96P31 734 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-209ENST00000366735 DEPDC7Q96QD5 511 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 PANX2Q96RD6 677 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 CPXM1Q96SM3 734 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 DUSP23Q9BVJ7 150 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 CALN1Q9BXU9 219 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 EDEM3Q9BZQ6 932 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SARDHQ9UL12 918 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 TBC1D30Q9Y2I9 924 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 HS3ST4Q9Y661 456 aa12.69□□□□□ -0.38
MRPL55-209ENST00000366735 TEX51A0A1B0GUA7 166 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 A0A1W2PQJ5 194 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 GTPBP10A4D1E9 387 aaKnown RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 CAPN8A6NHC0 703 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 A6NNZ2 444 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 H3BM21 787 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 PES1O00541 588 aaKnown RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 ATXN7O15265 892 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 NRDCO43847 1150 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 BRINP1O60477 761 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 MFAP3LO75121 409 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 PAGE1O75459 146 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 GRAP2O75791 330 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 PCDH8O95206 1070 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 F9P00740 461 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 SRCP12931 536 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 CD46P15529 392 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 MSNP26038 577 aaKnown RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 CHRNA3P32297 505 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 METAP1P53582 386 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 BPIFB4P59827 614 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 INSM1Q01101 510 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 SLC6A3Q01959 620 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 TAF5Q15542 800 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 C5orf22Q49AR2 442 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 C6orf132Q5T0Z8 1188 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 PIP5KL1Q5T9C9 394 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 BROXQ5VW32 411 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 OLFML1Q6UWY5 402 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 HORMAD1Q86X24 394 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 LSMEM2Q8N112 164 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 KIAA1524Q8TCG1 905 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 SHC3Q92529 594 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 ALG14Q96F25 216 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 SIK2Q9H0K1 926 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 WDCPQ9H6R7 721 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 KLHL11Q9NVR0 708 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 IL36AQ9UHA7 158 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 CAPN11Q9UMQ6 739 aa12.68□□□□□ -0.38
MRPL55-209ENST00000366735 SMG1Q96Q15 3661 aaKnown RBP12.68□□□□□ -0.38
MRPL55-209ENST00000366735 A0A1W2PQU0 124 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 SLC31A1O15431 190 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 MT-CO3P00414 261 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 GP1BAP07359 652 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 SKILP12757 684 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 DGKAP23743 735 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 SULT1E1P49888 294 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 UCNP55089 124 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 CLDN6P56747 220 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 PCBP4P57723 403 aaKnown RBP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 KIAA1161Q6NSJ0 714 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 RETSATQ6NUM9 610 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 C22orf39Q6P5X5 142 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 KDM7AQ6ZMT4 941 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 ERN2Q76MJ5 926 aaKnown RBP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 GPR155Q7Z3F1 870 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 PTAR1Q7Z6K3 402 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 CRELD1Q96HD1 420 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 LGMNQ99538 433 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 MYOCQ99972 504 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 TKTL2Q9H0I9 626 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 PRORYQ9H606 182 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 ARHGEF38Q9NXL2 777 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.67□□□□□ -0.38
MRPL55-209ENST00000366735 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 NCKIPSDQ9NZQ3 722 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 VPS51Q9UID3 782 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 OR51B4Q9Y5P0 310 aa12.67□□□□□ -0.38
MRPL55-209ENST00000366735 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms