RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ARCQ7LC44 396 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 TMC6Q7Z403 805 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 ABI3BPQ7Z7G0 1075 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 ZNF677Q86XU0 584 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 DCP2Q8IU60 420 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 SLC25A45Q8N413 288 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 RYBPQ8N488 228 aaPredicted RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 EMC1Q8N766 993 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 FAM174AQ8TBP5 190 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 EPS8L1Q8TE68 723 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 IFT43Q96FT9 208 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 CRELD1Q96HD1 420 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 FEM1CQ96JP0 617 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 HEPHQ9BQS7 1158 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 NAA15Q9BXJ9 866 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 TM6SF2Q9BZW4 377 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 NUP62CLQ9H1M0 184 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 DNAJC28Q9NX36 388 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 CHMP5Q9NZZ3 219 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 PPARGC1AQ9UBK2 798 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 IPO11Q9UI26 975 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 TMEM59LQ9UK28 342 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 HPCAL4Q9UM19 191 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 ZFR2Q9UPR6 939 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 FCF1Q9Y324 198 aaKnown RBP8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
RNU4-59P-201ENST00000364447 IGSF10Q6WRI0 2623 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 RNF103O00237 685 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 KRIT1O00522 736 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 FPGTO14772 594 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 AP1G1O43747 822 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 BRINP1O60477 761 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZMPSTE24O75844 475 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 GFPT2O94808 682 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 MT-CO3P00414 261 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ITPKBP27987 946 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ACTN2P35609 894 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 EIF2S3P41091 472 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 MAPKAPK2P49137 400 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 HNRNPKP61978 463 aaKnown RBP eCLIP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ARF5P84085 180 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 SGCGQ13326 291 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 TMEM259Q4ZIN3 620 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF542PQ5EBM4 170 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 CARD16Q5EG05 197 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 DPY19L2P1Q6NXN4 242 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 KYAT3Q6YP21 454 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 PARS2Q7L3T8 475 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 BNIPLQ7Z465 357 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZSCAN30Q86W11 494 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF354CQ86Y25 554 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 CACTIN-AS1Q8N1I8 211 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 DCBLD1Q8N8Z6 715 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 OR6K2Q8NGY2 324 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 SLC20A1Q8WUM9 679 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 RFFLQ8WZ73 363 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ISG20Q96AZ6 181 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 C11orf70Q9BRQ4 267 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 SLC17A9Q9BYT1 436 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ABCG4Q9H172 646 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 SAMSN1Q9NSI8 373 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 TAB2Q9NYJ8 693 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF212Q9UDV6 495 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 OR12D3Q9UGF7 316 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 DNAI1Q9UI46 699 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 FADS3Q9Y5Q0 445 aa8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 FASNP49327 2511 aaKnown RBP8.33□□□□□ -1.08
RNU4-59P-201ENST00000364447 POM121BA6NF01 834 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 TSPAN6O43657 245 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 OPA1O60313 960 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 RAMP2O60895 175 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF821O75541 412 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 PAK4O96013 591 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 CKMT1AP12532 417 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 RHOQP17081 205 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 MMP8P22894 467 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 ADRA1BP35368 520 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 ACVRL1P37023 503 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 NSFP46459 744 aaKnown RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 RABIFP47224 123 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 DUSP3P51452 185 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 POLR2FP61218 127 aaKnown RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 SNRPD1P62314 119 aaKnown RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 CDR2Q01850 454 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 C15orf59Q2T9L4 293 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF805Q5CZA5 627 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 CT47A1Q5JQC4 288 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 FKBP15Q5T1M5 1219 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 TRIM72Q6ZMU5 477 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 LEKR1Q6ZMV7 388 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 PHLDB2Q86SQ0 1253 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 PARGQ86W56 976 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 SLC22A18ASQ8N1D0 253 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 ZNF548Q8NEK5 533 aaPredicted RBP8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 OR2AP1Q8NGE2 309 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 SLC30A5Q8TAD4 765 aa8.32□□□□□ -1.08
RNU4-59P-201ENST00000364447 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms