RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PIWIL4Q7Z3Z4 852 aaKnown RBP13.63□□□□□ -0.23
LDB3-202ENST00000361373 ELMO1Q92556 727 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 ABTB1Q969K4 478 aaPredicted RBP13.63□□□□□ -0.23
LDB3-202ENST00000361373 ANKDD1BA6NHY2 528 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 GPR25O00155 361 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 SPTLC1O15269 473 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 PMM2O15305 246 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 TPST1O60507 370 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 FAM153BP0C7A2 387 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 TNNI3P19429 210 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 KCNA3P22001 575 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
LDB3-202ENST00000361373 MAPK9P45984 424 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 FAM153CQ494X1 144 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 ATP13A4Q4VNC1 1196 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 LRRC23Q53EV4 343 aaPredicted RBP13.63□□□□□ -0.23
LDB3-202ENST00000361373 ADCK1Q86TW2 530 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 SAR1AQ9NR31 198 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 ATAD3AQ9NVI7 634 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 SFMBT1Q9UHJ3 866 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 ZMYM5Q9UJ78 669 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 V9GYQ6 96 aa13.63□□□□□ -0.23
LDB3-202ENST00000361373 SRRM3A6NNA2 597 aaPredicted RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 CAPN15O75808 1086 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 INHAP05111 366 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CLK1P49759 484 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.62□□□□□ -0.23
LDB3-202ENST00000361373 HLA-DQA1Q5Y7H0 255 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 DUPD1Q68J44 220 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 TXNDC11Q6PKC3 985 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 DOK6Q6PKX4 331 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 ARCQ7LC44 396 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 TMEM132CQ8N3T6 1108 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CCT7Q99832 543 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 TM6SF2Q9BZW4 377 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 ACSS3Q9H6R3 686 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CAPN10Q9HC96 672 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 HBS1LQ9Y450 684 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 NFATC1O95644 943 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 PTP4A2Q12974 167 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 KPNB1Q14974 876 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 ZNF614Q8N883 585 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
LDB3-202ENST00000361373 OXNAD1Q96HP4 312 aaPredicted RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 BBS4Q96RK4 519 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 C1orf232A0A0U1RR37 186 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 E7ENQ6 273 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 FCHO1O14526 889 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 C22orf31O95567 290 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 S100A3P33764 101 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 SCTRP47872 440 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 ZNF544Q6NX49 715 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 XYLT1Q86Y38 959 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CPA6Q8N4T0 437 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 FUBP3Q96I24 572 aaKnown RBP eCLIP13.62□□□□□ -0.23
LDB3-202ENST00000361373 TMEM237Q96Q45 408 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 KRT84Q9NSB2 600 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 NDUFA13Q9P0J0 144 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CCDC154A6NI56 674 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 MAN1A2O60476 641 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 LBPP18428 481 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 WARSP23381 471 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 CCT8P50990 548 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 NME5P56597 212 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 DSG1Q02413 1049 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 NOMO1Q15155 1222 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 RCN1Q15293 331 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 RBFAQ8N0V3 343 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 BEND7Q8N7W2 519 aaPredicted RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 SLC4A11Q8NBS3 891 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 COPS8Q99627 209 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 MRPL57Q9BQC6 102 aaKnown RBP13.62□□□□□ -0.23
LDB3-202ENST00000361373 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
LDB3-202ENST00000361373 MDM4O15151 490 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 ALOX15BO15296 676 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 CALCAP01258 141 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 NUDT17P0C025 328 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 PABPC1P11940 636 aaKnown RBP13.61□□□□□ -0.23
LDB3-202ENST00000361373 WNT3AP56704 352 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 TBL3Q12788 808 aaKnown RBP13.61□□□□□ -0.23
LDB3-202ENST00000361373 ATAT1Q5SQI0 421 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 RAET1GQ6H3X3 334 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 INPP5DQ92835 1189 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 DEC1Q9P2X7 70 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 FBXO5Q9UKT4 447 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 SNX13Q9Y5W8 968 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 TPP1O14773 563 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 ZNF682O95780 498 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 IL1BP01584 269 aa13.61□□□□□ -0.23
LDB3-202ENST00000361373 TLX1P31314 330 aaPredicted RBP13.61□□□□□ -0.23
LDB3-202ENST00000361373 RFX3P48380 749 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms