RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PHYKPLQ8IUZ5 450 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 C1orf167Q5SNV9 1468 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 ACKR2O00590 384 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 ULK1O75385 1050 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 ZMYM5Q9UJ78 669 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 SH3GLB1Q9Y371 365 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 SCTRP47872 440 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 CXorf56Q9H5V9 222 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 OR10H2O60403 315 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 SNAP91O60641 907 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 KLHL18O94889 574 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 PPIBP23284 216 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 ZMYND11Q15326 602 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 PCID2Q5JVF3 399 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 MYL9P24844 172 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 RNF44Q7L0R7 432 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 AIF1LQ9BQI0 150 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TMEM121Q9BTD3 319 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 KBTBD4Q9NVX7 518 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 CHST10O43529 356 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 PARNO95453 639 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 ZNF846Q147U1 533 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 CRY1Q16526 586 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 ZDHHC13Q8IUH4 622 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 STAG3L4Q8TBR4 150 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 GDPD5Q8WTR4 605 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TEKT5Q96M29 485 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 HTATIP2Q9BUP3 242 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.79□□□□□ -0.844e-7■■■■■ 40.8
CUX1-203ENST00000360264 PRDM8Q9NQV8 689 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 SAR1AQ9NR31 198 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TSPAN16Q9UKR8 245 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TSC22D2O75157 780 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 RPL4P36578 427 aaKnown RBP9.79□□□□□ -0.84
CUX1-203ENST00000360264 IQSEC1Q6DN90 963 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 RAET1GQ6H3X3 334 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TFAP2DQ7Z6R9 452 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 KATNAL2Q8IYT4 538 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 TMEM199Q8N511 208 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 CLN6Q9NWW5 311 aa9.79□□□□□ -0.84
CUX1-203ENST00000360264 PRKAR1AP10644 381 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 HERVK_113P62684 666 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 FAM92BQ6ZTR7 304 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 CDH24Q86UP0 819 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 DHRSXQ8N5I4 330 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 CCNB1IP1Q9NPC3 277 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 HAO1Q9UJM8 370 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 FARP2O94887 1054 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 ATP5C1P36542 298 aaKnown RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 DOK6Q6PKX4 331 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 GJD3Q8N144 294 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 EIF1ADQ8N9N8 165 aaKnown RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 HSFY1Q96LI6 401 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ZNF607Q96SK3 696 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ATP6V0D1P61421 351 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 PGM5Q15124 567 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SLC39A12Q504Y0 691 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 TMEM134Q9H6X4 195 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 LYNP07948 512 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ZNF286BP0CG31 522 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SLC47A2Q86VL8 602 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 BICRALQ6AI39 1079 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 HJURPQ8NCD3 748 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 PJA1Q8NG27 643 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 C18orf25Q96B23 403 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 KCNK4Q9NYG8 393 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 CLOCKO15516 846 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 NDST1P52848 882 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SMARCB1Q12824 385 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 HYIQ5T013 277 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 CLEC10AQ8IUN9 316 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 RASGEF1AQ8N9B8 481 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 SELENOMQ8WWX9 145 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 MLPHQ9BV36 600 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ATP5F1P24539 256 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 VBP1P61758 197 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 OTUD3Q5T2D3 398 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 ZNF57Q68EA5 555 aaPredicted RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 TTC27Q6P3X3 843 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ADGRG2Q8IZP9 1017 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 MCIDASD6RGH6 385 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 UBE2Q2LH0YL09 131 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 FMO4P31512 558 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 GMIPQ9P107 970 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 ZNHIT2Q9UHR6 403 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 TBC1D30Q9Y2I9 924 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 RIC1Q4ADV7 1423 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 STARP49675 285 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 MARSP56192 900 aaKnown RBP9.78□□□□□ -0.84
CUX1-203ENST00000360264 TCAIMQ8N3R3 496 aa9.78□□□□□ -0.84
CUX1-203ENST00000360264 TEX47Q8TBZ9 253 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms