RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PPM1JQ5JR12 505 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 FAM91A1Q658Y4 838 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 PRSS55Q6UWB4 352 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TAS1R1Q7RTX1 841 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ANKRD33Q7Z3H0 272 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SUGP1Q8IWZ8 645 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 GABPB2Q8TAK5 448 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 GIPC2Q8TF65 315 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 BCL7CQ8WUZ0 217 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SREK1Q8WXA9 508 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 IGSF8Q969P0 613 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 RPRD1AQ96P16 312 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 RANBP9Q96S59 729 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 FAM96AQ9H5X1 160 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 NT5MQ9NPB1 228 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TMEM216Q9P0N5 145 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 LNPEPQ9UIQ6 1025 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 A0A096LPK6 155 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TRAFD1O14545 582 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 RAMP2O60895 175 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SIN3BO75182 1162 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 EFEMP2O95967 443 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 FGF3P11487 239 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ATF6P18850 670 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TACR2P21452 398 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TARSP26639 723 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 IRX4P78413 519 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 POLD3Q15054 466 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SNX30Q5VWJ9 437 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 KIAA0930Q6ICG6 404 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 CMC1Q7Z7K0 106 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 CLEC14AQ86T13 490 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ZC3HC1Q86WB0 502 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TMEM173Q86WV6 379 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ARID3BQ8IVW6 561 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ABHD8Q96I13 439 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 FAM167BQ9BTA0 163 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ATP13A1Q9HD20 1204 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 HSFX1Q9UBD0 423 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 COPG2Q9UBF2 871 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 ZNF212Q9UDV6 495 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 HAO1Q9UJM8 370 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 DNMT3LQ9UJW3 386 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 DNAH12Q6ZR08 3092 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 HEATR9A2RTY3 570 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 F5H5T6 163 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 J3KR12 359 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 PRKCGP05129 697 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 T-ENOLP0DO92 83 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 CPA3P15088 417 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 SERPINB3P29508 390 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 ATP5C1P36542 298 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 PBX3P40426 434 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 SLC1A6P48664 564 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 CCL23P55773 120 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 SERINC3Q13530 473 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 KRT72Q14CN4 511 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 C5orf22Q49AR2 442 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 CES4AQ5XG92 561 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 ZNF354CQ86Y25 554 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 WDR75Q8IWA0 830 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 AZIN2Q96A70 460 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 ATXN7L3BQ96GX2 97 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 ZNF778Q96MU6 729 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 TSNARE1Q96NA8 513 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 MCOLN1Q9GZU1 580 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 STN1Q9H668 368 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 CCSER2Q9H7U1 834 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 TREX1Q9NSU2 369 aa18.54■□□□□ 0.56
PDLIM7-203ENST00000359895 H2AFYO75367 372 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 C2P06681 752 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 COL6A2P12110 1019 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 ARCN1P48444 511 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 ITKQ08881 620 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 SLC10A7Q0GE19 358 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 THOC5Q13769 683 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 CTC1Q2NKJ3 1217 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 RNF168Q8IYW5 571 aaPredicted RBP18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 KIF2BQ8N4N8 673 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 RDH11Q8TC12 318 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 MAGEC3Q8TD91 643 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 PPP4R1Q8TF05 950 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 PSMG2Q969U7 264 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 PABPC5Q96DU9 382 aaKnown RBP18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 TLK1Q9UKI8 766 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 TRIM33Q9UPN9 1127 aa18.53■□□□□ 0.56
PDLIM7-203ENST00000359895 VAPBO95292 243 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 ATP6V1G2O95670 118 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 KRT16P08779 473 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 RALBP11234 206 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 KCNA4P22459 653 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 PTPN4P29074 926 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 OR1E1P30953 314 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 OR1D2P34982 312 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 SERPINH1P50454 418 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 CSRP3P50461 194 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 IKBKEQ14164 716 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 GRM3Q14832 879 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 NADSYN1Q6IA69 706 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms