RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 AGPSO00116 658 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CACNG3O60359 315 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 TBX10O75333 385 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 ANXA9O76027 345 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 PRAMEF12O95522 483 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 ACSL3O95573 720 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 AP2A1O95782 977 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 TSHRP16473 764 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 HOXD9P28356 352 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 MTHFRP42898 656 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 MMP13P45452 471 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 GEMP55040 296 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CDH18Q13634 790 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 SLC29A2Q14542 456 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 ZNF77Q15935 545 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 KYNUQ16719 465 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CEP85LQ5SZL2 805 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 MPP7Q5T2T1 576 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 MARC1Q5VT66 337 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 RNF219Q5W0B1 726 aaPredicted RBP14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CXorf57Q6NSI4 855 aaKnown RBP14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 ATP11CQ8NB49 1132 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 DDI1Q8WTU0 396 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 PYROXD1Q8WU10 500 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 LRRC39Q96DD0 335 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 APOL5Q9BWW9 433 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 LRRC40Q9H9A6 602 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 ATP13A1Q9HD20 1204 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 GDE1Q9NZC3 331 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CLEC1BQ9P126 229 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 TBC1D14Q9P2M4 693 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 CCL26Q9Y258 94 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 DNAH14Q0VDD8 3507 aa14.09□□□□□ -0.15
PDLIM5-203ENST00000359265 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 MBTPS2O43462 519 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 KDELR3O43731 214 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 BANF1O75531 89 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 SUN1O94901 812 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 PEX11BO96011 259 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 CPP00450 1065 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 IVLP07476 585 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 PHBP35232 272 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 MAGEA3P43357 314 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 TNK2Q07912 1038 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ZNF844Q08AG5 666 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ZNF235Q14590 738 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 RFTN1Q14699 578 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 LBRQ14739 615 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 MSS51Q4VC12 460 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 NAPEPLDQ6IQ20 393 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 LRRC8BQ6P9F7 803 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ZNF534Q76KX8 674 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 GET4Q7L5D6 327 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ANKMY2Q8IV38 441 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 MFN1Q8IWA4 741 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 TEX26Q8N6G2 289 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 OR52K2Q8NGK3 314 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ITFG1Q8TB96 612 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 OTUB2Q96DC9 234 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ASIC4Q96FT7 647 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 NECTIN4Q96NY8 510 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 SH3GL2Q99962 352 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 GORASP1Q9BQQ3 440 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 SPON2Q9BUD6 331 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 MLPHQ9BV36 600 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 ACE2Q9BYF1 805 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 IRF2BPLQ9H1B7 796 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 VPS37BQ9H9H4 285 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 PDFQ9HBH1 243 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 NT5MQ9NPB1 228 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 UBA2Q9UBT2 640 aaPredicted RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 CHMP2BQ9UQN3 213 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 NFS1Q9Y697 457 aa14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.08□□□□□ -0.16
PDLIM5-203ENST00000359265 A0A0D9SEW6 157 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 GOLGA8KD6RF30 607 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 AP3B1O00203 1094 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 SPAG6O75602 509 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 OAS2P29728 719 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 NBL1P41271 181 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 ELK3P41970 407 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 SLC10A7Q0GE19 358 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 HP1BP3Q5SSJ5 553 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 OTOP3Q7RTS5 596 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 LINC00523Q86TU6 105 aa14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 CAND1Q86VP6 1230 aaKnown RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 ARID3BQ8IVW6 561 aaPredicted RBP14.07□□□□□ -0.16
PDLIM5-203ENST00000359265 NPAS3Q8IXF0 933 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms