RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 TRIM33Q9UPN9 1127 aa15.12■□□□□ 0.01
GABPB1-202ENST00000359031 ANKRD6Q9Y2G4 727 aa15.12■□□□□ 0.01
GABPB1-202ENST00000359031 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
GABPB1-202ENST00000359031 MICAL3Q7RTP6 2002 aa15.12■□□□□ 0.01
GABPB1-202ENST00000359031 SLC12A8A0AV02 714 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 DRGXA6NNA5 263 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 TBKBP1A7MCY6 615 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 CHUKO15111 745 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 PARNO95453 639 aaKnown RBP15.11■□□□□ 0.01
GABPB1-202ENST00000359031 PAMP19021 973 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 SERPINB3P29508 390 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 CMC1Q7Z7K0 106 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.11■□□□□ 0.013e-6■■□□□ 12.2
GABPB1-202ENST00000359031 NSMCE1Q8WV22 266 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 HMCESQ96FZ2 354 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 MRGPRX2Q96LB1 330 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 TTLL2Q9BWV7 592 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 FAM96AQ9H5X1 160 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 STN1Q9H668 368 aaKnown RBP15.11■□□□□ 0.01
GABPB1-202ENST00000359031 SP110Q9HB58 689 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 VPS45Q9NRW7 570 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 TMEM216Q9P0N5 145 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 COPG2Q9UBF2 871 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 MAGED2Q9UNF1 606 aaPredicted RBP15.11■□□□□ 0.01
GABPB1-202ENST00000359031 COL6A3P12111 3177 aa15.11■□□□□ 0.01
GABPB1-202ENST00000359031 A0A096LPK6 155 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SIN3BO75182 1162 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SOAT2O75908 522 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 CBX6O95503 412 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 CXCL10P02778 98 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 APOA4P06727 396 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 DNAJB1P25685 340 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 POLD2P49005 469 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 MAPKAPK2P49137 400 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 CSRP3P50461 194 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 IRX4P78413 519 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 POU6F1Q14863 301 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 TCTN1Q2MV58 587 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 PARP15Q460N3 678 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 PPM1JQ5JR12 505 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 RASIP1Q5U651 963 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 RAP1GAP2Q684P5 730 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 KIAA0930Q6ICG6 404 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 KDELC1Q6UW63 502 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 RSPO2Q6UXX9 243 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 RANBP10Q6VN20 620 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 TFAP2DQ7Z6R9 452 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 TEX26Q8N6G2 289 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 GPR152Q8TDT2 470 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SLC7A6OSQ96CW6 309 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 IMP4Q96G21 291 aaKnown RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ATXN7L3BQ96GX2 97 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 CRISPLD1Q9H336 500 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ARNT2Q9HBZ2 717 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 NOD2Q9HC29 1040 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SLC27A5Q9Y2P5 690 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SLC38A8A6NNN8 435 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 H2AFYO75367 372 aaKnown RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 PMPCBO75439 489 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 WFS1O76024 890 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 PTPN4P29074 926 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SLC8A1P32418 973 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SLC1A6P48664 564 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 WNT3AP56704 352 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 IL10RBQ08334 325 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ALFQ53S48 1182 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 MARC1Q5VT66 337 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 FBXL22Q6P050 247 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ZCCHC23Q6ZST2 131 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ZC3HC1Q86WB0 502 aaKnown RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 MIB1Q86YT6 1006 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 WDR75Q8IWA0 830 aaKnown RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 SREK1Q8WXA9 508 aaKnown RBP15.1■□□□□ 0.01
GABPB1-202ENST00000359031 AZIN2Q96A70 460 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 RANBP9Q96S59 729 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ATP13A1Q9HD20 1204 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 TREX1Q9NSU2 369 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 HCSTQ9UBK5 93 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 ZNF212Q9UDV6 495 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 NUMBLQ9Y6R0 609 aa15.1■□□□□ 0.01
GABPB1-202ENST00000359031 LAMA3Q16787 3333 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 FCHO1O14526 889 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 TLR5O60602 858 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 CCDC22O60826 627 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 RAMP2O60895 175 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 CNTN5O94779 1100 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 TBX18O95935 607 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 CPA3P15088 417 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 KCNA4P22459 653 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 YBEYP58557 167 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-202ENST00000359031 DUSP4Q13115 394 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 C10orf107Q8IVU9 208 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 PDZD8Q8NEN9 1154 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 RDH11Q8TC12 318 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 PIWIL2Q8TC59 973 aaKnown RBP15.09■□□□□ 0.01
GABPB1-202ENST00000359031 PPP4R1Q8TF05 950 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms