RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 RNF103O00237 685 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TULP2O00295 520 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 YKT6O15498 198 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 INSIG1O15503 277 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TSPAN6O43657 245 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 B4GALT3O60512 393 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 PMPCBO75439 489 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TM7SF2O76062 418 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 ZDHHC11BP0C7U3 371 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 RPL26P61254 145 aaKnown RBP9.33□□□□□ -0.92
UPF2-202ENST00000357604 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
UPF2-202ENST00000357604 PLEKHG6Q3KR16 790 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TTLL9Q3SXZ7 439 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 AASDHQ4L235 1098 aaPredicted RBP9.33□□□□□ -0.92
UPF2-202ENST00000357604 CTAGE3PQ8IX95 158 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 PYROXD1Q8WU10 500 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 SPATA16Q9BXB7 569 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 MID2Q9UJV3 735 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 TMEM59LQ9UK28 342 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 RPL26L1Q9UNX3 145 aaKnown RBP9.33□□□□□ -0.92
UPF2-202ENST00000357604 STON1Q9Y6Q2 735 aa9.33□□□□□ -0.92
UPF2-202ENST00000357604 hCG_1818297A0A087WSY0 165 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 A0A0A0MRY4 1105 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 OPA1O60313 960 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CACNG3O60359 315 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 DNAJC6O75061 913 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 TULP3O75386 442 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 TTC4O95801 387 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 MAP4P27816 1152 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 ITGA9Q13797 1035 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 TRIP13Q15645 432 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 KLHL38Q2WGJ6 581 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 SPATA13Q96N96 652 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 QKIQ96PU8 341 aaKnown RBP eCLIP9.32□□□□□ -0.922e-13■■■■■ 45.4
UPF2-202ENST00000357604 RAB6BQ9NRW1 208 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 UTP6Q9NYH9 597 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 MUTYHQ9UIF7 546 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 H3BMM5 538 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 LRCH4O75427 683 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 ITIH2P19823 946 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 ALDH3A1P30838 453 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 DUSP3P51452 185 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 RAET1GQ6H3X3 334 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CD300LGQ6UXG3 332 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 BBS12Q6ZW61 710 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 PTAR1Q7Z6K3 402 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 SRRM1Q8IYB3 904 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 XPO7Q9UIA9 1087 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 FBXO10Q9UK96 956 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CXorf51AA0A1B0GTR3 108 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 TMCC1O94876 653 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 POLBP06746 335 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 PTPN3P26045 913 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 COILP38432 576 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 PHEXP78562 749 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 IZUMO3Q5VZ72 239 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 STK40Q8N2I9 435 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 OR2AP1Q8NGE2 309 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CYB5D2Q8WUJ1 264 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 MSLNLQ96KJ4 702 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 DPH5Q9H2P9 285 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CWC15Q9P013 229 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 CLEC1BQ9P126 229 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 DRGXA6NNA5 263 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 KPNA5O15131 536 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 INHBAP08476 426 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 ZNF30P17039 623 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 CXCR5P32302 372 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 SERPINH1P50454 418 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 RPS24P62847 133 aaKnown RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 STXBP5Q5T5C0 1151 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 PAQR9Q6ZVX9 377 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 PIP4K2CQ8TBX8 421 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 MCCC1Q96RQ3 725 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 SLC7A5P2Q9GIP4 190 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 FBXL12Q9NXK8 326 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 PACSIN2Q9UNF0 486 aaPredicted RBP9.32□□□□□ -0.92
UPF2-202ENST00000357604 CYP8B1Q9UNU6 501 aa9.32□□□□□ -0.92
UPF2-202ENST00000357604 EVPLQ92817 2033 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 IFRD1O00458 451 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 CFIP05156 583 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 OR56A5P0C7T3 313 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 CD86P42081 329 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 MAPK9P45984 424 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 HNRNPDQ14103 355 aaKnown RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 BBS9Q3SYG4 887 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 TAF1BQ53T94 588 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 ANO7Q6IWH7 933 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 CYB5D1Q6P9G0 228 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 CIR1Q86X95 450 aaPredicted RBP9.31□□□□□ -0.92
UPF2-202ENST00000357604 SPEM1Q8N4L4 309 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 ZMIZ2Q8NF64 920 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 OR7D4Q8NG98 312 aa9.31□□□□□ -0.92
UPF2-202ENST00000357604 OR6P1Q8NGX9 317 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms