RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TECTAO75443 2155 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 FAM170BA6NMN3 283 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 HNRNPLP14866 589 aaKnown RBP eCLIP25.79■■□□□ 1.723e-24■■■■■ 36.5
SSBP3-202ENST00000357475 GEMIN4P57678 1058 aaKnown RBP25.79■■□□□ 1.72
SSBP3-202ENST00000357475 ZNF235Q14590 738 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 IHHQ14623 411 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 ANKRD20A2Q5SQ80 823 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 ANKRD20A1Q5TYW2 823 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 ANKRD20A3Q5VUR7 823 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 SERPINA13PQ6UXR4 307 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 GSTA5Q7RTV2 222 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 TAB3Q8N5C8 712 aaPredicted RBP25.79■■□□□ 1.72
SSBP3-202ENST00000357475 IL17RCQ8NAC3 791 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 OR6K2Q8NGY2 324 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 PSKH2Q96QS6 385 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 SEPT3Q9UH03 358 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 PCYOX1Q9UHG3 505 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 CKAP5Q14008 2032 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 ANKRD36A6QL64 1941 aa25.79■■□□□ 1.72
SSBP3-202ENST00000357475 CXorf51AA0A1B0GTR3 108 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CFAP69A5D8W1 941 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 DCXO43602 365 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 BNIP3LO60238 219 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 ADAM23O75077 832 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 RHOAP61586 193 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 ST8SIA6P61647 398 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CHPFQ8IZ52 775 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 RPLP0P6Q8NHW5 317 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 TEKT5Q96M29 485 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 LMAN1LQ9HAT1 526 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 KLHL8Q9P2G9 620 aaPredicted RBP25.78■■□□□ 1.72
SSBP3-202ENST00000357475 ATP8A1Q9Y2Q0 1164 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CTAGE15A4D2H0 777 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 C5orf60A6NFR6 353 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 INSIG1O15503 277 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 TTI1O43156 1089 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 MTSS1O43312 755 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 KLF8O95600 359 aaPredicted RBP25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CTAGE8P0CG41 777 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 STIP1P31948 543 aaKnown RBP25.78■■□□□ 1.72
SSBP3-202ENST00000357475 VASPP50552 380 aaPredicted RBP25.78■■□□□ 1.72
SSBP3-202ENST00000357475 SIGLEC14Q08ET2 396 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 ENPP2Q13822 863 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 PID1Q7Z2X4 250 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CTAGE6Q86UF2 777 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CTAGE4Q8IX94 777 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CEP112Q8N8E3 955 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 CASKIN2Q8WXE0 1202 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 PTPRN2Q92932 1015 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 VOPP1Q96AW1 172 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 SPATA13Q96N96 652 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 MGME1Q9BQP7 344 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 GORASP1Q9BQQ3 440 aa25.78■■□□□ 1.72
SSBP3-202ENST00000357475 TTC28Q96AY4 2481 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 STK25O00506 426 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 GCATO75600 419 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 METTL18O95568 372 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 NFKB1P19838 968 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 GKP32189 559 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 DSC2Q02487 901 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 NIPAL4Q0D2K0 466 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 TXNDC5Q8NBS9 432 aaKnown RBP25.77■■□□□ 1.72
SSBP3-202ENST00000357475 MNS1Q8NEH6 495 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 TRIM51Q9BSJ1 452 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 CEP44Q9C0F1 390 aa25.77■■□□□ 1.72
SSBP3-202ENST00000357475 RAD51CO43502 376 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 CR2P20023 1033 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 RPL22P35268 128 aaKnown RBP25.76■■□□□ 1.71
SSBP3-202ENST00000357475 NNMTP40261 264 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 VPS41P49754 854 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 DR1Q01658 176 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 ITKQ08881 620 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 GAS6Q14393 721 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 FAXCQ5TGI0 409 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 CCDC89Q8N998 374 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 KDM1BQ8NB78 822 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 CHST14Q8NCH0 376 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 PJA1Q8NG27 643 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 OR2A12Q8NGT7 310 aa25.76■■□□□ 1.71
SSBP3-202ENST00000357475 MRPS17Q9Y2R5 130 aaKnown RBP25.76■■□□□ 1.71
SSBP3-202ENST00000357475 SIN3BO75182 1162 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 NEBLO76041 1014 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 ECEL1O95672 775 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 KRT14P02533 472 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 MRPS21P82921 87 aaKnown RBP25.75■■□□□ 1.71
SSBP3-202ENST00000357475 HNRNPA1L2Q32P51 320 aaKnown RBP25.75■■□□□ 1.71
SSBP3-202ENST00000357475 FBXO43Q4G163 708 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 C9orf64Q5T6V5 341 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 KIAA1211LQ6NV74 962 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 DPY19L3Q6ZPD9 716 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 TRIM67Q6ZTA4 783 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 PCDH20Q8N6Y1 951 aaKnown RBP25.75■■□□□ 1.71
SSBP3-202ENST00000357475 ARRDC2Q8TBH0 407 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 SLCO2A1Q92959 643 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 ISG20Q96AZ6 181 aaKnown RBP25.75■■□□□ 1.71
SSBP3-202ENST00000357475 VAT1Q99536 393 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 SEMA3CQ99985 751 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 GLOD4Q9HC38 313 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 C2orf42Q9NWW7 574 aa25.75■■□□□ 1.71
SSBP3-202ENST00000357475 EVLQ9UI08 416 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms