RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 POLD2P49005 469 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 RPS7P62081 194 aaKnown RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 TCHHL1Q5QJ38 904 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 STRADAQ7RTN6 431 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 FTHL17Q9BXU8 183 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 BCAS3Q9H6U6 928 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 C8orf4Q9NR00 106 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 SF3B1O75533 1304 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 ADCY6O43306 1168 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 SNRPB2P08579 225 aaKnown RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 SNHG28P0DPA3 235 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 DRD4P21917 467 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 MATKP42679 507 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 MFSD5Q6N075 450 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 ULK2Q8IYT8 1036 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 C10orf53Q8N6V4 93 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 SH3GL2Q99962 352 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 ZYG11BQ9C0D3 744 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 GNPTGQ9UJJ9 305 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
COL9A1-202ENST00000357250 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
COL9A1-202ENST00000357250 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 KCNH1O95259 989 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ERVK-10P10266 1014 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 PSMB9P28065 219 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 HTR7P34969 479 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 SMARCB1Q12824 385 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 SLC39A12Q504Y0 691 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 INO80DQ53TQ3 878 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ARSHQ5FYA8 562 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 PRAMEF19Q5SWL8 479 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 UNC5AQ6ZN44 842 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 POU5F2Q8N7G0 328 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 C19orf18Q8NEA5 215 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 OSBPL6Q9BZF3 934 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 SGTAO43765 313 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 AMHP03971 560 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 NAGLUP54802 743 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 PPIDQ08752 370 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 GRIK3Q13003 919 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 CRY1Q16526 586 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TRMT11Q7Z4G4 463 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ADAMTSL2Q86TH1 951 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 BSNDQ8WZ55 320 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 FAM136AQ96C01 138 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 FAXDC2Q96IV6 333 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 GAD1Q99259 594 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 DHX33Q9H6R0 707 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ARMCX1Q9P291 453 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 RPS6KA6Q9UK32 745 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TRIM38O00635 465 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ZBTB22O15209 634 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 WFS1O76024 890 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TNK2Q07912 1038 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 INAQ16352 499 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 IQCKQ8N0W5 287 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ZSWIM2Q8NEG5 633 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 OR52K1Q8NGK4 314 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 NMD3Q96D46 503 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 EPB41L4BQ9H329 900 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 REEP1Q9H902 201 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ZNF112Q9UJU3 913 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 GIT1Q9Y2X7 761 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 B4GALT4O60513 344 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ENDOD1O94919 500 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 NFICP08651 508 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ZSCAN5DPP0CG00 497 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 CCNB1P14635 433 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TYMPP19971 482 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 RAB10P61026 200 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 BST1Q10588 318 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 C15orf59Q2T9L4 293 aaPredicted RBP11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TREML2Q5T2D2 321 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TRABD2AQ86V40 505 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 VPS45Q9NRW7 570 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 INVSQ9Y283 1065 aa11.88□□□□□ -0.51
COL9A1-202ENST00000357250 TMEM191CA6NGB0 347 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 COL6A2P12110 1019 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 JAK1P23458 1154 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
COL9A1-202ENST00000357250 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 HECTD3Q5T447 861 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 UTP15Q8TED0 518 aaKnown RBP11.87□□□□□ -0.51
COL9A1-202ENST00000357250 PROX1Q92786 737 aa11.87□□□□□ -0.51
COL9A1-202ENST00000357250 RNFT2Q96EX2 444 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms