RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MAGEA3P43357 314 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 LMAN1P49257 510 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 PLK1P53350 603 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 ZNF844Q08AG5 666 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 PDIA2Q13087 525 aaKnown RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 CYTH1Q15438 398 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 PLEKHG6Q3KR16 790 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 CCDC117Q8IWD4 279 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 GAS2L1Q99501 681 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 FAM83CQ9BQN1 747 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 SLC25A51Q9H1U9 297 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 TTC24A2A3L6 582 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 GJB3O75712 270 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 MMP2P08253 660 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 DSC2Q02487 901 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 KYNUQ16719 465 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 PRPF39Q86UA1 669 aaKnown RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 GOLGA6L1Q8N7Z2 621 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 ARRDC2Q8TBH0 407 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 SUSD6Q92537 303 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 ZBTB9Q96C00 473 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 IMP4Q96G21 291 aaKnown RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 C9orf72Q96LT7 481 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 KXD1Q9BQD3 176 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 EBF3Q9H4W6 596 aa18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 USP15Q9Y4E8 981 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-202ENST00000356800 OTOL1A6NHN0 477 aaPredicted RBP18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ERI2A8K979 691 aaKnown RBP18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 TRIM24O15164 1050 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 USP12O75317 370 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 MT-CO1P00395 513 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ABHD2P08910 425 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ADH5P11766 374 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 FCHO2Q0JRZ9 810 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 SLC12A1Q13621 1099 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 PRPSAP1Q14558 356 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ZNF235Q14590 738 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 RFTN1Q14699 578 aaPredicted RBP18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 BBS9Q3SYG4 887 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 FUT11Q495W5 492 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 PITRM1Q5JRX3 1037 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 CEP85LQ5SZL2 805 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 PARM1Q6UWI2 310 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 IGDCC3Q8IVU1 814 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ZBED8Q8IZ13 594 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 NAT16Q8N8M0 369 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 OR2W6PQ8NHA6 318 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 PSKH2Q96QS6 385 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 C2orf49Q9BVC5 232 aaPredicted RBP18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 TMEM109Q9BVC6 243 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 HPS4Q9NQG7 708 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 SEPT3Q9UH03 358 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 CD207Q9UJ71 328 aa18.43■□□□□ 0.54
SMARCD3-202ENST00000356800 ANKRD36A6QL64 1941 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 H3BQ06 376 aaPredicted RBP18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 HOXC11O43248 304 aaPredicted RBP18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 ANXA9O76027 345 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 ACSL3O95573 720 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 RGRP47804 291 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 ITKQ08881 620 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 IFFO1Q0D2I5 559 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 GAB4Q2WGN9 574 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 ALG1LQ6GMV1 187 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 LRRC8BQ6P9F7 803 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 KDELC1Q6UW63 502 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 ANKMY2Q8IV38 441 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 MFSD6LQ8IWD5 586 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 FGF14Q92915 247 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 E2F7Q96AV8 911 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 TADA1Q96BN2 335 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 MGME1Q9BQP7 344 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 XAB2Q9HCS7 855 aaKnown RBP18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 PIH1D1Q9NWS0 290 aaKnown RBP18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 GGA2Q9UJY4 613 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 FBXO10Q9UK96 956 aa18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 AAR2Q9Y312 384 aaKnown RBP18.42■□□□□ 0.54
SMARCD3-202ENST00000356800 GOLGA8KD6RF30 607 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 K7ERQ8 282 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 TMCC1O94876 653 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ADH1CP00326 375 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SHBGP04278 402 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MLNP12872 115 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 OAS2P29728 719 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CD86P42081 329 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 GEMP55040 296 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SARNPP82979 210 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 GRM2Q14416 872 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 INO80DQ53TQ3 878 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 KIAA0907Q7Z7F0 614 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CROCCP2Q86T23 111 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 C12orf40Q86WS4 652 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MPP5Q8N3R9 675 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 OR52K1Q8NGK4 314 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ATP2A3Q93084 1043 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ACDQ96AP0 544 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ELSPBP1Q96BH3 223 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 NSMCE3Q96MG7 304 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 NECTIN4Q96NY8 510 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SEMA3CQ99985 751 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms