RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PCDH9Q9HC56 1237 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TCF7L2Q9NQB0 619 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KLF15Q9UIH9 416 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NRCAMQ92823 1304 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 GIMD1P0DJR0 217 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 LAG3P18627 525 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MKRN4PQ13434 485 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 GIT2Q14161 759 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NBPF12Q5TAG4 269 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TLDC1Q6P9B6 456 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ARMC8Q8IUR7 673 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SMYD1Q8NB12 490 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 METTL21AQ8WXB1 218 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SLC38A2Q96QD8 506 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TSPAN18Q96SJ8 248 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PDCD2LQ9BRP1 358 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PABPC3Q9H361 631 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ACKR2O00590 384 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PRODHO43272 600 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 WARSP23381 471 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MLH1P40692 756 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KLK7P49862 253 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SMIM11AP58511 58 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MYBPC1Q00872 1141 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 BEX3Q00994 111 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CHADLQ6NUI6 762 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FAM171BQ6P995 826 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MARK2Q7KZI7 788 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TRAPPC9Q96Q05 1148 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 C6orf62Q9GZU0 229 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FAM192AQ9GZU8 254 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ELOVL2Q9NXB9 296 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 VPS4AQ9UN37 437 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CLUHO75153 1309 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TAF4O00268 1085 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TSC22D2O75157 780 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ITGA2P17301 1181 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TARSP26639 723 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PSMB9P28065 219 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NUMBP49757 651 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SEC24CP53992 1094 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FKBP1BP68106 108 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 OVGP1Q12889 678 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 DEFB115Q30KQ5 88 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 HYIQ5T013 277 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 METTL6Q8TCB7 284 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ITFG2Q969R8 447 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NSMCE2Q96MF7 247 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 BRD9Q9H8M2 597 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ZDHHC4Q9NPG8 344 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TRIM10Q9UDY6 481 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ARFIP1P53367 373 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 LGALS3BPQ08380 585 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CBX2Q14781 532 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PSMD5Q16401 504 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NDUFA9Q16795 377 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 AGKQ53H12 422 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 GALNT7Q86SF2 657 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 EPS8L3Q8TE67 593 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 HEXDCQ8WVB3 486 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ATG4AQ8WYN0 398 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 COL26A1Q96A83 441 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 APOPT1Q96IL0 206 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 P2RX7Q99572 595 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ELL3Q9HB65 397 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NDUFA13Q9P0J0 144 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MARK1Q9P0L2 795 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TPRKBQ9Y3C4 175 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FAM208AQ9UK61 1670 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MAGEA13PA6NCF6 341 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 LACTBL1A8MY62 500 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 F8VZ95 297 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FOXN3O00409 490 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TBL1XO60907 577 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 LYNP07948 512 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 SCNN1GP51170 649 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CXCL9Q07325 125 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KPNB1Q14974 876 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 INO80DQ53TQ3 878 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TCEAL6Q6IPX3 200 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KIAA0408Q6ZU52 694 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KIF2BQ8N4N8 673 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 OR10G6Q8NH81 332 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TTYH3Q9C0H2 523 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 CYLDQ9NQC7 956 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KBTBD4Q9NVX7 518 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 MON2Q7Z3U7 1717 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 H3BM21 787 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 GYS1P13807 737 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 ETS1P14921 441 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PAX7P23759 505 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 FASP25445 335 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 KLRK1P26718 216 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 TGFBR2P37173 567 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 NEK3P51956 506 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 HK2P52789 917 aa5.6□□□□□ -1.51
PTPRD-202ENST00000356435 RPP38P78345 283 aaKnown RBP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 PPIGQ13427 754 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRD-202ENST00000356435 OASLQ15646 514 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms