RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM209AQ5JX71 171 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 DEPDC1Q5TB30 811 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ATG16L1Q676U5 607 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 TMC5Q6UXY8 1006 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 CHST15Q7LFX5 561 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 CATSPER4Q7RTX7 472 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 CDKL3Q8IVW4 592 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 SDR16C5Q8N3Y7 309 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ISOC1Q96CN7 298 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 RMND5BQ96G75 393 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 KCTD15Q96SI1 283 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 TBCBQ99426 244 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 EBNA1BP2Q99848 306 aaKnown RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 SLC7A5P2Q9GIP4 190 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 POLE4Q9NR33 117 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 EPS15L1Q9UBC2 864 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 BCAP29Q9UHQ4 241 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ITGA11Q9UKX5 1188 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 PSAT1Q9Y617 370 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 SIP14410 1827 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 KRBA1A5PL33 1030 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 H3BRB1 525 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 KCNK1O00180 336 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 TNPO2O14787 897 aaKnown RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 SLC25A27O95847 323 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ZNF182P17025 639 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 JAK1P23458 1154 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 L1CAMP32004 1257 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ARHGAP1Q07960 439 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ZNF534Q76KX8 674 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 AHI1Q8N157 1196 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ADAM32Q8TC27 787 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 OSMRQ99650 979 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ZNF358Q9NW07 568 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 DSEQ9UL01 958 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 CORINQ9Y5Q5 1042 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 GOLGA8QA0A0J9YX86 632 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 BCLAF3A2AJT9 711 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 GOLGA8OA6NCC3 632 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CAPN14A8MX76 684 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 GOLGA8NF8WBI6 632 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 MAGP20916 626 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 INCA1Q0VD86 236 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 FASTKD1Q53R41 847 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 N4BP2L1Q5TBK1 243 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 SLC9A4Q6AI14 798 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ADGRF2Q8IZF7 708 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SLC15A4Q8N697 577 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMG6-202ENST00000354901 FAM47BQ8NA70 645 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 COLGALT1Q8NBJ5 622 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 BHLHE22Q8NFJ8 381 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 MARK4Q96L34 752 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CSPG4P5Q96PW8 444 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PKP2Q99959 881 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 GCOM2Q9BZD3 368 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 NXF3Q9H4D5 531 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 DTLQ9NZJ0 730 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CACNG4Q9UBN1 327 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 DGKBQ9Y6T7 804 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CITO14578 2027 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SF3B1O75533 1304 aaKnown RBP eCLIP9.51□□□□□ -0.895e-6■■■■■ 39
SMG6-202ENST00000354901 FAM47E-STBD1D6RA91 191 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 AGRPO00253 132 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 TPP1O14773 563 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ERVK-10P10266 1014 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SAT1P21673 171 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ACAT1P24752 427 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 EPHX2P34913 555 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SLC26A2P50443 739 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 WASHC5Q12768 1159 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SLC2A14Q8TDB8 520 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 SLC35F5Q8WV83 523 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PGBD4Q96DM1 585 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 MOCOSQ96EN8 888 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 APOL2Q9BQE5 337 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 MRPL46Q9H2W6 279 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 KCNK4Q9NYG8 393 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ZNF229Q9UJW7 825 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 NUP205Q92621 2012 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 ANKRD34BA5PLL1 514 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 STX16-NPEPL1H3BU86 382 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CLDN5O00501 218 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PFDN6O15212 129 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 AQP9O43315 295 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 MFSD11O43934 449 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMG6-202ENST00000354901 PRKCHP24723 683 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 EPHA3P29320 983 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 EEF1DP29692 281 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 ARL4AP40617 200 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 PGGT1BP53609 377 aa9.51□□□□□ -0.89
SMG6-202ENST00000354901 CLPPQ16740 277 aaPredicted RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 AARS2Q5JTZ9 985 aaKnown RBP9.51□□□□□ -0.89
SMG6-202ENST00000354901 FRMD7Q6ZUT3 714 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms