RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 F9P00740 461 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 HNRNPLP14866 589 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL13A1-201ENST00000354547 ZYG11AQ6WRX3 759 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 PDSS2Q86YH6 399 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 MFSD6LQ8IWD5 586 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 TMEM151AQ8N4L1 468 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 PPP2R3CQ969Q6 453 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 GCNAQ96QF7 691 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 NDNQ99608 321 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 C1QTNF1Q9BXJ1 281 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 SPATS2LQ9NUQ6 558 aaKnown RBP19.84■□□□□ 0.77
COL13A1-201ENST00000354547 ACOT9Q9Y305 439 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 DLX3O60479 287 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 GLDCP23378 1020 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 HCAR3P49019 387 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 MRPS22P82650 360 aaKnown RBP19.84■□□□□ 0.77
COL13A1-201ENST00000354547 DSELQ8IZU8 1212 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 RTKNQ9BST9 563 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 DNAJB4Q9UDY4 337 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 ASB3Q9Y575 518 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 FAM95CA0A1B0GW59 222 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 CAPN8A6NHC0 703 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 GRID2O43424 1007 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 PGK1P00558 417 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 ZNF865P0CJ78 1059 aaPredicted RBP19.83■□□□□ 0.77
COL13A1-201ENST00000354547 MTTPP55157 894 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 CACNB2Q08289 660 aaPredicted RBP19.83■□□□□ 0.77
COL13A1-201ENST00000354547 MSLNQ13421 630 aaPredicted RBP19.83■□□□□ 0.77
COL13A1-201ENST00000354547 SLC12A1Q13621 1099 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 FAM110CQ1W6H9 321 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 RAB41Q5JT25 222 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 IL31Q6EBC2 164 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 ZNF470Q6ECI4 717 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 FAM156AQ8NDB6 213 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 TMA16Q96EY4 203 aaKnown RBP19.83■□□□□ 0.77
COL13A1-201ENST00000354547 PARK7Q99497 189 aaKnown RBP19.83■□□□□ 0.77
COL13A1-201ENST00000354547 FSD1LQ9BXM9 530 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 DRC3Q9H069 523 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 GTSE1Q9NYZ3 720 aa19.83■□□□□ 0.77
COL13A1-201ENST00000354547 PDCD11Q14690 1871 aaKnown RBP19.83■□□□□ 0.76
COL13A1-201ENST00000354547 C9IYK1 514 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 F8W810 466 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 DDHD2O94830 711 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 PLK1P53350 603 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 AIF1P55008 147 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 GJA9P57773 515 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 MED21Q13503 144 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 MMEL1Q495T6 779 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 LRRC8EQ6NSJ5 796 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 PKN3Q6P5Z2 889 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 ACAD11Q709F0 780 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 SNX31Q8N9S9 440 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 SLC38A7Q9NVC3 462 aa19.83■□□□□ 0.76
COL13A1-201ENST00000354547 MYADML2A6NDP7 307 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 M0QZ92 97 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 THRAP10827 490 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 CPT1AP50416 773 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 THOP1P52888 689 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 CYLC2Q14093 348 aaPredicted RBP19.82■□□□□ 0.76
COL13A1-201ENST00000354547 RASIP1Q5U651 963 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 SLC30A9Q6PML9 568 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 ANKRD23Q86SG2 305 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 KYQ8NBH2 561 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 NR1H4Q96RI1 486 aaPredicted RBP19.82■□□□□ 0.76
COL13A1-201ENST00000354547 SLC39A8Q9C0K1 460 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 CDH9Q9ULB4 789 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 XRCC1P18887 633 aaPredicted RBP19.82■□□□□ 0.76
COL13A1-201ENST00000354547 GSTA3Q16772 222 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 DCLRE1AQ6PJP8 1040 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 VAT1Q99536 393 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 KIFC1Q9BW19 673 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 TRPV6Q9H1D0 765 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 RBM22Q9NW64 420 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL13A1-201ENST00000354547 CDYLQ9Y232 598 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 RAD54BQ9Y620 910 aa19.82■□□□□ 0.76
COL13A1-201ENST00000354547 TTC24A2A3L6 582 aaPredicted RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 RGSL1A5PLK6 1076 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 CCL22O00626 93 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 STMN1P16949 149 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 SLC1A2P43004 574 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 BTKQ06187 659 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 FSCN1Q16658 493 aaKnown RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PCID2Q5JVF3 399 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 LINC00523Q86TU6 105 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 JADE3Q92613 823 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 NPAS2Q99743 824 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 RTP3Q9BQQ7 232 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 H3BNX3 289 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PAGE1O75459 146 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 MT-CO1P00395 513 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 TAS2R39P59534 338 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 ITKQ08881 620 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 CSHL1Q14406 222 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 SH2D4BQ5SQS7 431 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 LRRTM3Q86VH5 581 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 LSMEM2Q8N112 164 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 TMEM86AQ8N2M4 240 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 IFT43Q96FT9 208 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 BRD8Q9H0E9 1235 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 AK5Q9Y6K8 562 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms