RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 M0QYV0 167 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 O00370 1275 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 AQP9O43315 295 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 ZRANB2O95218 330 aaKnown RBP eCLIP11.46□□□□□ -0.57
RTN3-204ENST00000354497 ITGB2P05107 769 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 RPIAP49247 311 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 INHBCP55103 352 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 YWHAEP62258 255 aaKnown RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 LRMPQ12912 555 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 SLC12A1Q13621 1099 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 FZD2Q14332 565 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 MANEAQ5SRI9 462 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 PMF1Q6P1K2 205 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 VASH2Q86V25 355 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 PACS2Q86VP3 889 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 PARGQ86W56 976 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 CCAR2Q8N163 923 aaKnown RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 SCML4Q8N228 414 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 FBXO39Q8N4B4 442 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 ZSCAN1Q8NBB4 408 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
RTN3-204ENST00000354497 CCDC3Q9BQI4 270 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 MAPK8IP1Q9UQF2 711 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 TRAF3IP3Q9Y228 551 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 FHOD1Q9Y613 1164 aa11.46□□□□□ -0.57
RTN3-204ENST00000354497 PTPN13Q12923 2485 aa11.46□□□□□ -0.58
RTN3-204ENST00000354497 SYNJ2BP-COX16A0A087WUM0 186 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 EME2A4GXA9 379 aaPredicted RBP11.45□□□□□ -0.58
RTN3-204ENST00000354497 PLD2O14939 933 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 MCF2LO15068 1137 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ALOX15BO15296 676 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 STX10O60499 249 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ADCY5O95622 1261 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CSF2P04141 144 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 HGFP14210 728 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 JUNDP17535 347 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 GTF2H1P32780 548 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ME1P48163 572 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CYP4F2P78329 520 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ADCY2Q08462 1091 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CCDC15Q0P6D6 951 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ADAM9Q13443 819 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 C1orf61Q13536 156 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CUL2Q13617 745 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CUL4AQ13619 759 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
RTN3-204ENST00000354497 TBR1Q16650 682 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 C4orf17Q53FE4 359 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 RABGAP1LQ5R372 815 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 TCERG1LQ5VWI1 586 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 NEK5Q6P3R8 708 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ABI3BPQ7Z7G0 1075 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 DCP2Q8IU60 420 aaKnown RBP11.45□□□□□ -0.58
RTN3-204ENST00000354497 PAGE5Q96GU1 130 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 PPP1R13BQ96KQ4 1090 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 CCDC114Q96M63 670 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 COX16Q9P0S2 106 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 SEPT10Q9P0V9 454 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 SALL4Q9UJQ4 1053 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 VPS28Q9UK41 221 aa11.45□□□□□ -0.58
RTN3-204ENST00000354497 ZFR2Q9UPR6 939 aaKnown RBP11.45□□□□□ -0.58
RTN3-204ENST00000354497 A0A087WUV0 522 aaPredicted RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 SYCE3A1L190 88 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 POM121BA6NF01 834 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 ATP9BO43861 1147 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 FBXO21O94952 628 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 SMC2O95347 1197 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 YEATS4O95619 227 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 CTSLP07711 333 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 NME1P15531 152 aaKnown RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 RPL13P26373 211 aaKnown RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 CHRNA3P32297 505 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 UGT1A5P35504 534 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 PDX1P52945 283 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 ADKP55263 362 aaKnown RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 CENPCQ03188 943 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 DCAF17Q5H9S7 520 aaPredicted RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 LCLAT1Q6UWP7 414 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 KYAT3Q6YP21 454 aaKnown RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 RAB11FIP2Q7L804 512 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 RBFAQ8N0V3 343 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 ATP6V0D2Q8N8Y2 350 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 WDR48Q8TAF3 677 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 NAT6Q93015 286 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 SLC39A13Q96H72 371 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 FAXDC2Q96IV6 333 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 BMFQ96LC9 184 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 STRADBQ9C0K7 418 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 ST7Q9NRC1 585 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 ARGLU1Q9NWB6 273 aaPredicted RBP11.44□□□□□ -0.58
RTN3-204ENST00000354497 GULP1Q9UBP9 304 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 PISDQ9UG56 409 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 SLC12A6Q9UHW9 1150 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
RTN3-204ENST00000354497 CSNK1G3Q9Y6M4 447 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms