RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 FAM13CQ8NE31 585 aa15.78■□□□□ 0.12
MBD1-205ENST00000353909 UNC93B1Q9H1C4 597 aa15.78■□□□□ 0.12
MBD1-205ENST00000353909 SAR1AQ9NR31 198 aa15.78■□□□□ 0.12
MBD1-205ENST00000353909 MIA3Q5JRA6 1907 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 NEBLO76041 1014 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 UPP2O95045 317 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 CPA3P15088 417 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 ETFBP38117 255 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 SEPT6Q14141 434 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 VWA5B1Q5TIE3 1220 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 NADSYN1Q6IA69 706 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 CFAP52Q8N1V2 620 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 ELAC1Q9H777 363 aaKnown RBP15.77■□□□□ 0.12
MBD1-205ENST00000353909 ZNF212Q9UDV6 495 aa15.77■□□□□ 0.12
MBD1-205ENST00000353909 WASH4PA8MWX3 477 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 G3V2L1 256 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 TRAFD1O14545 582 aaPredicted RBP15.77■□□□□ 0.11
MBD1-205ENST00000353909 RALBP11234 206 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 RHOQP17081 205 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 PTPN4P29074 926 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 ACVRL1P37023 503 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 CD86P42081 329 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 GLRBP48167 497 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 ALDH18A1P54886 795 aaKnown RBP15.77■□□□□ 0.11
MBD1-205ENST00000353909 GEMP55040 296 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 INSCQ1MX18 579 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 ICE2Q659A1 982 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 PDPK2PQ6A1A2 396 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 TIGD7Q6NT04 549 aaPredicted RBP15.77■□□□□ 0.11
MBD1-205ENST00000353909 KDELC1Q6UW63 502 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 RINLQ6ZS11 566 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 RAB3IL1Q8TBN0 382 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 BTN2A3PQ96KV6 586 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 RPRD1AQ96P16 312 aaPredicted RBP15.77■□□□□ 0.11
MBD1-205ENST00000353909 CADM1Q9BY67 442 aaKnown RBP15.77■□□□□ 0.11
MBD1-205ENST00000353909 TMEM248Q9NWD8 314 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 TCAF1Q9Y4C2 921 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 ACTL7AQ9Y615 435 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.11
MBD1-205ENST00000353909 TK2O00142 265 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CCL22O00626 93 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 TLR5O60602 858 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SLC2A3P11169 496 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 TRIP4Q15650 581 aaPredicted RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 SPDYAQ5MJ70 313 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 RFWD3Q6PCD5 774 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SLC41A1Q8IVJ1 513 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 PGBD5Q8N414 524 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 PIWIL2Q8TC59 973 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 NSL1Q96IY1 281 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 RILPQ96NA2 401 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CFHR5Q9BXR6 569 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.76■□□□□ 0.11
MBD1-205ENST00000353909 TLR8Q9NR97 1041 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 CLIC5Q9NZA1 410 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 FNDC1Q4ZHG4 1894 aaPredicted RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 IGLV3-10A0A075B6K4 115 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 TIMM44O43615 452 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SERPINE1P05121 402 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 MMP2P08253 660 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 COL6A1P12109 1028 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 UBAP2LQ14157 1087 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 ZNF789Q5FWF6 425 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 RAPH1Q70E73 1250 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 DEFB128Q7Z7B8 93 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CEP97Q8IW35 865 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 ARHGAP18Q8N392 663 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 TMEM151AQ8N4L1 468 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SLAIN1Q8ND83 568 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 AGR3Q8TD06 166 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 GPR22Q99680 433 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 PPP1R12CQ9BZL4 782 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 ENTPD7Q9NQZ7 604 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 LNPEPQ9UIQ6 1025 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 PSMD3O43242 534 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SBK3P0C264 359 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SLC1A2P43004 574 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CCR10P46092 362 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CSE1LP55060 971 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 BFSP2Q13515 415 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 HNRNPDQ14103 355 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 USP10Q14694 798 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 MARC1Q5VT66 337 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CCDC91Q7Z6B0 441 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 NPAS4Q8IUM7 802 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.76■□□□□ 0.11
MBD1-205ENST00000353909 ATP6V0D2Q8N8Y2 350 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 SEPT8Q92599 483 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 IMP4Q96G21 291 aaKnown RBP15.76■□□□□ 0.11
MBD1-205ENST00000353909 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 TAS2R1Q9NYW7 299 aa15.76■□□□□ 0.11
MBD1-205ENST00000353909 CAPN14A8MX76 684 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 ENO1P06733 434 aaKnown RBP15.75■□□□□ 0.11
MBD1-205ENST00000353909 SLC35E2BP0CK96 405 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 CSRP3P50461 194 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 NDST2P52849 883 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 USP4Q13107 963 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 TUBB3Q13509 450 aa15.75■□□□□ 0.11
MBD1-205ENST00000353909 SPPL2BQ8TCT7 592 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms